Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005638360.1 |
| length | 260 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 3 |
| gene id | LOC120554287 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053135.1 |
| NCBI id | CM020932.1 |
| chromosome length | 21835524 |
| location | 16505591 ~ 16506631 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU319478 | lncRNA | downstream | 152734 | 16349688 ~ 16352857 (-) | False | LOC120554218 |
| XR_005638349.1 | lncRNA | downstream | 160326 | 16340797 ~ 16345265 (-) | True | LOC120554275 |
| TU319473 | lncRNA | downstream | 181355 | 16322888 ~ 16324236 (-) | True | G235351 |
| TU319330 | lncRNA | downstream | 184074 | 16321111 ~ 16321517 (-) | True | G235242 |
| TU319295 | lncRNA | downstream | 260194 | 16245127 ~ 16245397 (-) | True | G235225 |
| XR_005638345.1 | lncRNA | upstream | 56173 | 16562804 ~ 16567091 (-) | False | LOC120554273 |
| XR_005638344.1 | lncRNA | upstream | 56173 | 16562804 ~ 16567016 (-) | True | LOC120554273 |
| TU319509 | lncRNA | upstream | 56183 | 16562814 ~ 16567015 (-) | False | LOC120554273 |
| TU319516 | lncRNA | upstream | 105352 | 16611983 ~ 16613711 (-) | True | G235387 |
| TU319479 | lncRNA | upstream | 175096 | 16681727 ~ 16711192 (-) | True | G235357 |
| XM_039792957.1 | mRNA | downstream | 73159 | 16410760 ~ 16432432 (-) | False | LOC120554212 |
| XM_039792953.1 | mRNA | downstream | 73159 | 16410760 ~ 16432432 (-) | False | LOC120554212 |
| XM_039792954.1 | mRNA | downstream | 73227 | 16410760 ~ 16432364 (-) | False | LOC120554212 |
| XM_039792955.1 | mRNA | downstream | 73233 | 16410760 ~ 16432358 (-) | False | LOC120554212 |
| XM_039793025.1 | mRNA | downstream | 119296 | 16380312 ~ 16386295 (-) | True | LOC120554247 |
| XM_039792978.1 | mRNA | upstream | 25331 | 16531962 ~ 16556455 (-) | False | LOC120554223 |
| XM_039792976.1 | mRNA | upstream | 25331 | 16531962 ~ 16556455 (-) | False | LOC120554223 |
| XM_039792975.1 | mRNA | upstream | 25331 | 16531962 ~ 16556455 (-) | True | LOC120554223 |
| XM_039792942.1 | mRNA | upstream | 110072 | 16616703 ~ 16638195 (-) | True | LOC120554206 |
| XM_039793051.1 | mRNA | upstream | 229555 | 16736186 ~ 16742288 (-) | False | LOC120554263 |
| unassigned_transcript_1647 | other | downstream | 661 | 16504858 ~ 16504930 (-) | True | trnat-cgu_16 |
| unassigned_transcript_1645 | other | downstream | 5061 | 16500458 ~ 16500530 (-) | True | trnam-cau_66 |
| unassigned_transcript_1644 | other | downstream | 49130 | 16456388 ~ 16456461 (-) | True | trnat-agu_41 |
| unassigned_transcript_1643 | other | downstream | 118746 | 16386772 ~ 16386845 (-) | True | trnat-agu_40 |
| XR_005638580.1 | other | downstream | 130626 | 16374777 ~ 16374965 (-) | True | LOC120554797 |
| TU319517 | other | upstream | 105352 | 16611983 ~ 16616316 (-) | False | G235387 |
| unassigned_transcript_1673 | other | upstream | 221803 | 16728434 ~ 16728507 (-) | True | trnat-agu_55 |
| XR_005638337.1 | other | upstream | 229555 | 16736186 ~ 16742288 (-) | True | LOC120554263 |
| unassigned_transcript_1675 | other | upstream | 249362 | 16755993 ~ 16756065 (-) | True | trnat-cgu_19 |
| unassigned_transcript_1684 | other | upstream | 357246 | 16863877 ~ 16863949 (-) | True | trnat-ugu_45 |
