RNA id: unassigned_transcript_1574



Basic Information


Item Value
RNA id unassigned_transcript_1574
length 72
RNA type tRNA
GC content 0.47
exon number 1
gene id trnaq-uug_7
representative True

Chromosome Information


Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 15791317 ~ 15791388 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GGTTCCATGGTGTAATGGTTAGCACTCTGGACTTTGAATCCAGTGATCCGAGTTCAAATCTCGCTGGAACCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU319122 lncRNA downstream 125435 15660293 ~ 15665882 (-) True G235075
TU319096 lncRNA downstream 233901 15556638 ~ 15557416 (-) True G235053
XR_005638347.1 lncRNA downstream 305830 15482306 ~ 15485487 (-) False LOC120554274
TU319213 lncRNA upstream 91237 15882625 ~ 15883001 (-) True G235151
XR_005638352.1 lncRNA upstream 182187 15973575 ~ 15991395 (-) True LOC120554279
TU319276 lncRNA upstream 340198 16131586 ~ 16132246 (-) True G235208
TU319284 lncRNA upstream 408944 16200332 ~ 16200591 (-) True G235215
TU319295 lncRNA upstream 453739 16245127 ~ 16245397 (-) True G235225
XM_039793008.1 mRNA downstream 10114 15767770 ~ 15781203 (-) True LOC120554237
XM_039792961.1 mRNA downstream 36458 15738442 ~ 15754859 (-) True LOC120554215
XM_039792969.1 mRNA downstream 91614 15684567 ~ 15699703 (-) True cep70
XM_039792543.1 mRNA upstream 94256 15885644 ~ 15905030 (-) True LOC120553994
XM_039792943.1 mRNA upstream 162480 15953868 ~ 15966585 (-) True LOC120554208
XM_039792944.1 mRNA upstream 162480 15953868 ~ 15962533 (-) False LOC120554208
XM_039792545.1 mRNA upstream 385341 16176729 ~ 16183893 (-) True LOC120553996
XM_039792927.1 mRNA upstream 457306 16248694 ~ 16288150 (-) True LOC120554197
unassigned_transcript_1573 other downstream 1029 15790216 ~ 15790288 (-) True trnak-cuu_18
unassigned_transcript_1572 other downstream 1598 15789648 ~ 15789719 (-) True trnav-cac_14
unassigned_transcript_1571 other downstream 2918 15788327 ~ 15788399 (-) True trnak-cuu_17
unassigned_transcript_1570 other downstream 4925 15786321 ~ 15786392 (-) True trnaq-uug_6
XR_005638386.1 other downstream 777503 14969522 ~ 15013814 (-) False LOC120554377
unassigned_transcript_1575 other upstream 3548 15794936 ~ 15795009 (-) True trnaq-uug_8
unassigned_transcript_1576 other upstream 4046 15795434 ~ 15795516 (-) True trnal-aag_12
unassigned_transcript_1577 other upstream 6915 15798303 ~ 15798374 (-) True trnaq-uug_9
unassigned_transcript_1578 other upstream 9579 15800967 ~ 15801049 (-) True trnal-aag_13
unassigned_transcript_1579 other upstream 11184 15802572 ~ 15802643 (-) True trnaq-uug_10