RNA id: unassigned_transcript_1575



Basic Information


Item Value
RNA id unassigned_transcript_1575
length 74
RNA type tRNA
GC content 0.47
exon number 1
gene id trnaq-uug_8
representative True

Chromosome Information


Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 15794936 ~ 15795009 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GGTTCCATGGTGTAATGGTTAGCACTCTGGACTTTGAATCCAGTGATCCGAGTTCAAATCTCGTGGTGGAACCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU319122 lncRNA downstream 129054 15660293 ~ 15665882 (-) True G235075
TU319096 lncRNA downstream 237520 15556638 ~ 15557416 (-) True G235053
XR_005638347.1 lncRNA downstream 309449 15482306 ~ 15485487 (-) False LOC120554274
TU319213 lncRNA upstream 87616 15882625 ~ 15883001 (-) True G235151
XR_005638352.1 lncRNA upstream 178566 15973575 ~ 15991395 (-) True LOC120554279
TU319276 lncRNA upstream 336577 16131586 ~ 16132246 (-) True G235208
TU319284 lncRNA upstream 405323 16200332 ~ 16200591 (-) True G235215
TU319295 lncRNA upstream 450118 16245127 ~ 16245397 (-) True G235225
XM_039793008.1 mRNA downstream 13733 15767770 ~ 15781203 (-) True LOC120554237
XM_039792961.1 mRNA downstream 40077 15738442 ~ 15754859 (-) True LOC120554215
XM_039792969.1 mRNA downstream 95233 15684567 ~ 15699703 (-) True cep70
XM_039792543.1 mRNA upstream 90635 15885644 ~ 15905030 (-) True LOC120553994
XM_039792943.1 mRNA upstream 158859 15953868 ~ 15966585 (-) True LOC120554208
XM_039792944.1 mRNA upstream 158859 15953868 ~ 15962533 (-) False LOC120554208
XM_039792545.1 mRNA upstream 381720 16176729 ~ 16183893 (-) True LOC120553996
XM_039792927.1 mRNA upstream 453685 16248694 ~ 16288150 (-) True LOC120554197
unassigned_transcript_1574 other downstream 3548 15791317 ~ 15791388 (-) True trnaq-uug_7
unassigned_transcript_1573 other downstream 4648 15790216 ~ 15790288 (-) True trnak-cuu_18
unassigned_transcript_1572 other downstream 5217 15789648 ~ 15789719 (-) True trnav-cac_14
unassigned_transcript_1571 other downstream 6537 15788327 ~ 15788399 (-) True trnak-cuu_17
unassigned_transcript_1570 other downstream 8544 15786321 ~ 15786392 (-) True trnaq-uug_6
unassigned_transcript_1576 other upstream 425 15795434 ~ 15795516 (-) True trnal-aag_12
unassigned_transcript_1577 other upstream 3294 15798303 ~ 15798374 (-) True trnaq-uug_9
unassigned_transcript_1578 other upstream 5958 15800967 ~ 15801049 (-) True trnal-aag_13
unassigned_transcript_1579 other upstream 7563 15802572 ~ 15802643 (-) True trnaq-uug_10
unassigned_transcript_1580 other upstream 8061 15803070 ~ 15803152 (-) True trnal-aag_14