RNA id: TU322770


Basic Information

Item Value
RNA id TU322770
length 438
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id LOC120555119
representative False

Chromosome Information

Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 26383 ~ 112045 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

aaactcctctcctctatcaacatccgtccctctgaaatgaagccgactaaaccgtgacgctgctttatgtttttgtctctgtatcctcagagtccagaggccaggtcacagtgactcagcctggagcagtgagctctgctctgggaggctccgtctccatcagctgtaggaccagTCAGGATGTTCATGGTGGGAGCTATCTACActggtaccaacagagagatggagaaactcctAAACTGCTCATTTACTATACTAGCACTCGACAATCAGGGATTCCAGatcgttttacaggcagtggatcaaactctgacttcactctgaccatcagtggagtccagactgaagatgcagcagtttactactgtcagagtTTTCATGTTATCAACAGCCAgtatgtgtacACGTTCggtggaggaaccagactgaATGTTAACT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU322917 lncRNA downstream 20088 97242 ~ 109670 (+) True G237674
XR_005638642.1 lncRNA downstream 30936 108090 ~ 108490 (+) True LOC120555179
TU322866 lncRNA downstream 45968 123122 ~ 139332 (+) True G237627
TU322819 lncRNA downstream 47168 124322 ~ 139761 (+) True G237622
TU322820 lncRNA downstream 47168 124322 ~ 139761 (+) False G237622
unassigned_transcript_1705 other upstream 15263 10675 ~ 11189 (+) True LOC120555132
unassigned_transcript_1708 other downstream 68853 146007 ~ 146527 (+) True LOC120555134
TU322788 other downstream 76325 153479 ~ 154318 (+) False G237621
unassigned_transcript_1710 other downstream 92246 169400 ~ 169894 (+) True LOC120555157
unassigned_transcript_1711 other downstream 101225 178379 ~ 178996 (+) True LOC120555149
TU322922 other downstream 101242 178396 ~ 178985 (+) False LOC120555149

Expression Profile