RNA id: TU322795


Basic Information

Item Value
RNA id TU322795
length 857
lncRNA type inter_gene
GC content 0.53
exon number 5
gene id G237621
representative False

Chromosome Information

Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 153479 ~ 668474 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gatctccgtcctcatctggactctcctctgctgctgcttcacagagtccagaggccaggtcacagtgactcagcctggagcagtgagctctgctctgggaggctccgtctccatcagctgtaggatCAGTCAGAATGTTTATAATGGGAACTATCTACActggtaccaacagagagatggagaaactcctAAACTGCTCATTTACTATGCTAGCACTCGACAATCAGGGATTCCAGatcgttttacaggcagtggatcaaactctgacttcactctgaccatcagtggagtccagactgaagatgcagcagtttactactgtcagagtGTTCACAGTGGGCctgtgtacACGTTCggtggaggaaccagactgaATGTTGGAAGTGATGTCCGTCCCACCCTGACGGTGCTGCCCCCCTCCAGTGAGGAGCTGCTGAAGGGGAAGGCCACACTCATGTGCCTGGCCAACAAGGGCTTCCCCTCAGACTGGAGTCTGGCCTGGAAGGtggacggcagcagcagcagcagcagctgggaggagagcaggagcCAGGGTGCTGGGGAAGGACGGCAAATACAGCTGGAGCAGCACCCTGAGGCTCCCTAAAGACCAGTGGGAGAAGGTGGGCTCTGTGACCTGTGAGGCCACCGGGCGCCCAGACTCCGctctcagagacactgaggagagaCCAGTGTGACTGATCTcagtctgctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctgtctaattACATGTTTCATTGATAGTTGTGTAGCTTGTTGTActtttgatgatgtcatcacaatAAATCCCTTTTCATCAAATCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU322828 lncRNA upstream 19609 464293 ~ 484541 (+) False G237623
TU322834 lncRNA upstream 20007 464293 ~ 484143 (+) False G237623
TU322943 lncRNA upstream 55463 442868 ~ 448687 (+) True G237696
TU322878 lncRNA upstream 83875 419897 ~ 420275 (+) True G237637
TU322871 lncRNA upstream 109688 393955 ~ 394462 (+) True G237631
unassigned_transcript_1752 other upstream 21288 482243 ~ 482862 (+) True LOC120555140
TU322887 other upstream 21298 482235 ~ 482852 (+) False LOC120555140
unassigned_transcript_1750 other upstream 52214 451021 ~ 451936 (+) True LOC120555146
unassigned_transcript_1749 other upstream 79277 424392 ~ 424873 (+) True LOC120555110
unassigned_transcript_1748 other upstream 95577 408092 ~ 408573 (+) True LOC120555108

Expression Profile