RNA id: TU322800


Basic Information

Item Value
RNA id TU322800
length 284
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G237621
representative False

Chromosome Information

Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 153479 ~ 668474 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GAGTCCAGCGGTCGTacacagtgactcagcctggagcagtgagctctgctctgggaggctccgtctccatcagctgtaggatCAGTCAGAGGGTTTATTCTGACTGGTTAGCCTGGTACCAACAGAGAAGATGGAGAAACTCATAAACTGCTCATTTACGATACTACTACTCGACAATCAGGGATTCCAGatcgttttacaggcagtggatcaaactctgacttcactctgaccatcagtggagtccagactgaagatgcagcagtttactactgtcagagtTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005638643.1 lncRNA upstream 17879 512012 ~ 536359 (+) True LOC120555180
TU322809 lncRNA upstream 19521 480367 ~ 534717 (+) False G237621
TU322792 lncRNA upstream 21835 528251 ~ 532403 (+) False G237621
TU322828 lncRNA upstream 69697 464293 ~ 484541 (+) False G237623
TU322834 lncRNA upstream 70095 464293 ~ 484143 (+) False G237623
TU322954 lncRNA downstream 11750 609931 ~ 618056 (+) False LOC120555115
TU322948 lncRNA downstream 24793 622974 ~ 640996 (+) True G237701
unassigned_transcript_1756 other upstream 15751 537575 ~ 538487 (+) True LOC120555128
unassigned_transcript_1755 other upstream 19522 534212 ~ 534716 (+) True LOC120555160
unassigned_transcript_1753 other upstream 41351 512218 ~ 512887 (+) True LOC120555141
unassigned_transcript_1752 other upstream 71376 482243 ~ 482862 (+) True LOC120555140
TU322887 other upstream 71386 482235 ~ 482852 (+) False LOC120555140
unassigned_transcript_1758 other downstream 15260 613441 ~ 614109 (+) True LOC120555137
unassigned_transcript_1759 other downstream 19601 617782 ~ 643704 (+) True LOC120555115
TU322799 other downstream 25873 624054 ~ 643661 (+) False G237621
TU322775 other downstream 36250 634431 ~ 643661 (+) False G237621
TU322774 other downstream 36503 634684 ~ 643661 (+) False G237621

Expression Profile