RNA id: TU322821


Basic Information

Item Value
RNA id TU322821
length 284
lncRNA type inter_gene
GC content 0.48
exon number 3
gene id G237622
representative False

Chromosome Information

Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 124322 ~ 139761 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTAAAGACCAGTGGGAGAAGGTGGGCTCTGTGACCTGTGAGGCCACCCAGGGCTCCCAGACTCCGctctcagagacactgaggagagaCCAGTGTTCCCAGTCCTGACCTGACTCACTGGGACTCTGCTACTGGTTTCACTCTGATACTGATCTCAGTCTGCTCTctgcttctctctctctctctctctctctctctctgtttatctcTTTCCCTCACTCACTGTCTAATTACATGTTTCATTGATAAAGTGTGTTGCATGTTTCAATTTTGATTTTAACACAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU322915 lncRNA upstream 5824 37736 ~ 118498 (+) True G237672
TU322917 lncRNA upstream 14652 97242 ~ 109670 (+) True G237674
XR_005638642.1 lncRNA upstream 15832 108090 ~ 108490 (+) True LOC120555179
TU322845 lncRNA upstream 19389 14747 ~ 104933 (+) True G237623
TU322862 lncRNA downstream 3734 143495 ~ 151481 (+) False G237626
TU322863 lncRNA downstream 3734 143495 ~ 215838 (+) True G237626
TU322864 lncRNA downstream 3734 143495 ~ 173026 (+) False G237626
TU322786 lncRNA downstream 19123 158884 ~ 159535 (+) False G237621
TU322793 lncRNA downstream 19123 158884 ~ 164397 (+) False G237621
TU322767 other upstream 12277 26452 ~ 112045 (+) True LOC120555119
unassigned_transcript_1708 other downstream 6246 146007 ~ 146527 (+) True LOC120555134
TU322788 other downstream 13718 153479 ~ 154318 (+) False G237621
unassigned_transcript_1710 other downstream 29639 169400 ~ 169894 (+) True LOC120555157
unassigned_transcript_1711 other downstream 38618 178379 ~ 178996 (+) True LOC120555149
TU322922 other downstream 38635 178396 ~ 178985 (+) False LOC120555149

Expression Profile