RNA id: TU322833



Basic Information


Item Value
RNA id TU322833
length 664
lncRNA type inter_gene
GC content 0.53
exon number 2
gene id G237623
representative False

Chromosome Information


Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 14747 ~ 484541 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


atactgtatatgttcatttaagaaagGAACACATGATGGCAGTCATTCTTGGATCAATAAGCTCGGACGACATTAAGTTGAtacatttgtctttattgttttaACATACAGAGAATATCAGCATTACTGCAAGCAACACAAGATGAACTTTCAAATTGTGATGAatctgtagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagtagcagAGAGCAGACTGAGATCAGTATCAGAGTGAAACCAGTAGCAGAGTCCCAGTGAGTCAGGTCAGGACTGGGAACACTGGtctctcctcagtgtctctgagagCGGAGTCTGGGAGCCCTGGGTGGCCTCACAGGTCACAGAGCCCACCTTCTCCCACTGGTCTTTAGGGAGCCTCAGGGTGCTGCTCCAGCTGTACTTGCCGTCCTTCCCCAGCACCCCGGGgctcctgctctcctcccagctgctgctgctgctgctgtccaccTTCCAGGCCAGACTCCAGTCTGAGGGGAAGCCCTTGTTGGCCAGGCACATGAGCGTGGCCTTCCCCTTCAGCAGCTCATCACTGGAGGGGGGCAGCACCGTCAGGGTGGGACGGACATCACCTAGGAGACACCAATCAGCTTAGAGGACAGGGAccacacagctg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU322863 lncRNA upstream 29400 143495 ~ 215838 (+) True G237626
TU322864 lncRNA upstream 72212 143495 ~ 173026 (+) False G237626
TU322793 lncRNA upstream 80841 158884 ~ 164397 (+) False G237621
TU322786 lncRNA upstream 85703 158884 ~ 159535 (+) False G237621
TU322862 lncRNA upstream 93757 143495 ~ 151481 (+) False G237626
TU322895 lncRNA downstream 98227 378434 ~ 378954 (+) False LOC120555106
TU322871 lncRNA downstream 113748 393955 ~ 394462 (+) True G237631
TU322878 lncRNA downstream 139690 419897 ~ 420275 (+) True G237637
TU322943 lncRNA downstream 162661 442868 ~ 448687 (+) True G237696
TU322828 lncRNA downstream 184086 464293 ~ 484541 (+) False G237623
unassigned_transcript_1721 other upstream 1312 243414 ~ 243926 (+) True LOC120555143
unassigned_transcript_1720 other upstream 9290 235423 ~ 235948 (+) True LOC120555122
unassigned_transcript_1719 other upstream 19282 225484 ~ 225956 (+) True LOC120555097
unassigned_transcript_1718 other upstream 25975 218791 ~ 219263 (+) True LOC120555096
unassigned_transcript_1717 other upstream 31171 213580 ~ 214067 (+) True LOC120555095
unassigned_transcript_1731 other downstream 2297 282504 ~ 283027 (+) True LOC120555136
unassigned_transcript_1732 other downstream 17649 297856 ~ 298370 (+) True LOC120555133
unassigned_transcript_1733 other downstream 25531 305738 ~ 306219 (+) True LOC120555130
unassigned_transcript_1734 other downstream 36015 316222 ~ 323114 (+) True LOC120555126
unassigned_transcript_1736 other downstream 46719 326926 ~ 327634 (+) True LOC120555153

Expression Profile