RNA id: TU322856



Basic Information


Item Value
RNA id TU322856
length 505
RNA type TUCP
GC content 0.49
exon number 3
gene id G237624
representative False

Chromosome Information


Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 262995 ~ 316779 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


catagagagccactttgcatcagcagcaccatgctccagtgctctgggagagtttatagtcctgagagttgaacactggatgactgacagctgtccttcatgacaacagaagacacagaaatcctcctcatcaaaaacatgactttgatctccgtcctcttctggactctcctctgctgctgcttcacagagtccagcGGTCAGTacacagtgactcagcctggagcagtgagctctgctctgggaggctccgtctccatcagctgtaggaccagTCAGAAGGTTTATGGTGGGAACCATTTATCctggtaccaacagagagatggagaaactcctAAACTGCTCATTTACGGTGCTAGCACTCGACAATCAGGGATTCCAGGtcgttttacaggcagtggatcaaactctgacttcactctgaccatcagtggagtccagactgaagatgcagcagtttactactgtcagagtCAACACTACATCAACAGTCAgtatgtgttca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU322838 lncRNA upstream 10542 245238 ~ 259245 (+) False G237623
TU322884 lncRNA upstream 20524 243574 ~ 249263 (+) True G237641
TU322830 lncRNA upstream 23909 14747 ~ 245878 (+) False G237623
TU322895 lncRNA downstream 103075 378434 ~ 378954 (+) False LOC120555106
TU322871 lncRNA downstream 118596 393955 ~ 394462 (+) True G237631
TU322878 lncRNA downstream 144538 419897 ~ 420275 (+) True G237637
TU322943 lncRNA downstream 167509 442868 ~ 448687 (+) True G237696
TU322828 lncRNA downstream 188934 464293 ~ 484541 (+) False G237623
unassigned_transcript_1726 other upstream 3299 265822 ~ 266488 (+) True LOC120555155
unassigned_transcript_1724 other upstream 12675 256482 ~ 257112 (+) True LOC120555148
unassigned_transcript_1723 other upstream 20711 248595 ~ 249076 (+) True LOC120555099
unassigned_transcript_1721 other upstream 25861 243414 ~ 243926 (+) True LOC120555143
unassigned_transcript_1720 other upstream 33839 235423 ~ 235948 (+) True LOC120555122
unassigned_transcript_1730 other downstream 2809 278168 ~ 278818 (+) True LOC120555152
unassigned_transcript_1731 other downstream 7145 282504 ~ 283027 (+) True LOC120555136
unassigned_transcript_1732 other downstream 22497 297856 ~ 298370 (+) True LOC120555133
unassigned_transcript_1733 other downstream 30379 305738 ~ 306219 (+) True LOC120555130
unassigned_transcript_1734 other downstream 40863 316222 ~ 323114 (+) True LOC120555126

Expression Profile