RNA id: TU322862



Basic Information


Item Value
RNA id TU322862
length 333
lncRNA type inter_gene
GC content 0.53
exon number 2
gene id G237626
representative False

Chromosome Information


Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 143495 ~ 215838 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TGATTTGATGAAAAGGGATTTattgtgatgacatcatcaaaagTACAACAAGCTACACAACTATCAATGAAACATGTAAttagacagtgagagagagagagagagagagagagagagagagagagagagagagagcagactgAGATCAGTCACACTGGtctctcctcagtgtctctgagagCGGAGTCTGGGAGCCCTGGGTGGCCTCACAGGTCACAGAGCCCACCTTCTCCCACTGGTCTTTAGGGAGCCTCAGGGTGCTGCTCCAGCTGTATTTGCCGTCCTTCCCCAGCACCCCGGGgctcctgctctcctcccagctgctgctgctgc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU322819 lncRNA upstream 3734 124322 ~ 139761 (+) True G237622
TU322820 lncRNA upstream 3734 124322 ~ 139761 (+) False G237622
TU322821 lncRNA upstream 3734 124322 ~ 139761 (+) False G237622
TU322822 lncRNA upstream 3734 124322 ~ 139761 (+) False G237622
TU322823 lncRNA upstream 3734 124322 ~ 139761 (+) False G237622
TU322786 lncRNA downstream 7403 158884 ~ 159535 (+) False G237621
TU322793 lncRNA downstream 7403 158884 ~ 164397 (+) False G237621
TU322805 lncRNA downstream 84050 235531 ~ 651704 (+) False G237621
TU322884 lncRNA downstream 92093 243574 ~ 249263 (+) True G237641
TU322833 lncRNA downstream 93757 245238 ~ 280207 (+) False G237623
TU322767 other upstream 31450 26452 ~ 112045 (+) True LOC120555119
TU322788 other downstream 1998 153479 ~ 154318 (+) False G237621
unassigned_transcript_1710 other downstream 17919 169400 ~ 169894 (+) True LOC120555157
unassigned_transcript_1711 other downstream 26898 178379 ~ 178996 (+) True LOC120555149
TU322922 other downstream 26915 178396 ~ 178985 (+) False LOC120555149
unassigned_transcript_1713 other downstream 36275 187756 ~ 188498 (+) True LOC120555145

Expression Profile