RNA id: TU322864


Basic Information

Item Value
RNA id TU322864
length 360
lncRNA type inter_gene
GC content 0.53
exon number 3
gene id G237626
representative False

Chromosome Information

Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 143495 ~ 215838 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TGATTTGATGAAAAGGGATTTattgtgatgacatcatcaaaagTACAACAAGCTACACAACTATCAATGAAACATGTAAttagacagtgagagagagagagagagagagagagagagagagagagagagagagagcagactgAGATCAGTCACACTGGtctctcctcagtgtctctgagagCGGAGTCTGGGAGCCCTGGGTGGCCTCACAGGTCACAGAGCCCACCTTCTCCCACTGGTCTTTAGGGAGCCTCAGGGTGCTGCTCCAGCTGTATTTGCCGTCCTTCCCCAGCACCCCGGGgctcctgctctcctcccaGCTGCTCCAGCTGTATTTGCCGTCCTTCCCCAGCACCCCGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU322819 lncRNA upstream 3734 124322 ~ 139761 (+) True G237622
TU322820 lncRNA upstream 3734 124322 ~ 139761 (+) False G237622
TU322821 lncRNA upstream 3734 124322 ~ 139761 (+) False G237622
TU322822 lncRNA upstream 3734 124322 ~ 139761 (+) False G237622
TU322823 lncRNA upstream 3734 124322 ~ 139761 (+) False G237622
TU322805 lncRNA downstream 62505 235531 ~ 651704 (+) False G237621
TU322884 lncRNA downstream 70548 243574 ~ 249263 (+) True G237641
TU322833 lncRNA downstream 72212 245238 ~ 280207 (+) False G237623
TU322838 lncRNA downstream 72212 245238 ~ 259245 (+) False G237623
TU322858 lncRNA downstream 89969 262995 ~ 316779 (+) True G237624
TU322767 other upstream 31450 26452 ~ 112045 (+) True LOC120555119
unassigned_transcript_1711 other downstream 5353 178379 ~ 178996 (+) True LOC120555149
TU322922 other downstream 5370 178396 ~ 178985 (+) False LOC120555149
unassigned_transcript_1713 other downstream 14730 187756 ~ 188498 (+) True LOC120555145
unassigned_transcript_1715 other downstream 19755 192781 ~ 193294 (+) True LOC120555127
unassigned_transcript_1716 other downstream 33352 206378 ~ 206859 (+) True LOC120555093

Expression Profile