RNA id: TU322878



Basic Information


Item Value
RNA id TU322878
length 268
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G237637
representative True

Chromosome Information


Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 419897 ~ 420275 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ctgacagctgtccttcatcacaacagaagacacagaaatcctcctcatcaaaaacatgactttgatctccgtcctcatctggactctcctctgctgctgcttcacagagtccagaggccaggtcacagtgactcagcctggagcagtgagctctgctctgggaggctccgtctccatcagctgtaggaccagTCAGAATGTTTATAATGGGAACTATCTACActggtaccaacagagagatggagaaactcctAAACTGCTCATTTAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU322871 lncRNA upstream 25435 393955 ~ 394462 (+) True G237631
TU322895 lncRNA upstream 40943 378434 ~ 378954 (+) False LOC120555106
TU322858 lncRNA upstream 103118 262995 ~ 316779 (+) True G237624
TU322857 lncRNA upstream 113685 275032 ~ 306212 (+) False G237624
TU322833 lncRNA upstream 139690 245238 ~ 280207 (+) False G237623
TU322943 lncRNA downstream 22593 442868 ~ 448687 (+) True G237696
TU322828 lncRNA downstream 44018 464293 ~ 484541 (+) False G237623
TU322834 lncRNA downstream 44018 464293 ~ 484143 (+) False G237623
TU322809 lncRNA downstream 60092 480367 ~ 534717 (+) False G237621
TU322798 lncRNA downstream 67549 487824 ~ 651704 (+) False G237621
unassigned_transcript_1748 other upstream 11324 408092 ~ 408573 (+) True LOC120555108
unassigned_transcript_1745 other upstream 29647 389760 ~ 390250 (+) True LOC120555107
unassigned_transcript_1744 other upstream 40850 376531 ~ 379047 (+) True LOC120555106
unassigned_transcript_1743 other upstream 52065 367324 ~ 367832 (+) True LOC120555123
unassigned_transcript_1741 other upstream 55534 363742 ~ 364363 (+) True LOC120555138
unassigned_transcript_1749 other downstream 4117 424392 ~ 424873 (+) True LOC120555110
unassigned_transcript_1750 other downstream 30746 451021 ~ 451936 (+) True LOC120555146
TU322887 other downstream 61960 482235 ~ 482852 (+) False LOC120555140
unassigned_transcript_1752 other downstream 61968 482243 ~ 482862 (+) True LOC120555140
unassigned_transcript_1753 other downstream 91943 512218 ~ 512887 (+) True LOC120555141

Expression Profile