RNA id: TU322944


Basic Information

Item Value
RNA id TU322944
length 217
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G237697
representative True

Chromosome Information

Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 500627 ~ 559660 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagggtgatgagctgtgttgtgaggaaccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU322828 lncRNA upstream 16086 464293 ~ 484541 (+) False G237623
TU322834 lncRNA upstream 16484 464293 ~ 484143 (+) False G237623
TU322943 lncRNA upstream 51940 442868 ~ 448687 (+) True G237696
TU322878 lncRNA upstream 80352 419897 ~ 420275 (+) True G237637
TU322871 lncRNA upstream 106165 393955 ~ 394462 (+) True G237631
TU322886 lncRNA downstream 34884 594544 ~ 616711 (+) True G237643
TU322950 lncRNA downstream 36096 595756 ~ 648909 (+) True G237702
TU322954 lncRNA downstream 50271 609931 ~ 618056 (+) False LOC120555115
TU322948 lncRNA downstream 63314 622974 ~ 640996 (+) True G237701
unassigned_transcript_1752 other upstream 17765 482243 ~ 482862 (+) True LOC120555140
TU322887 other upstream 17775 482235 ~ 482852 (+) False LOC120555140
unassigned_transcript_1750 other upstream 48691 451021 ~ 451936 (+) True LOC120555146
unassigned_transcript_1749 other upstream 75754 424392 ~ 424873 (+) True LOC120555110
unassigned_transcript_1748 other upstream 92054 408092 ~ 408573 (+) True LOC120555108
unassigned_transcript_1757 other downstream 3193 562853 ~ 636019 (+) True LOC120555117
TU322794 other downstream 9475 569135 ~ 651704 (+) False G237621
unassigned_transcript_1758 other downstream 53781 613441 ~ 614109 (+) True LOC120555137
unassigned_transcript_1759 other downstream 58122 617782 ~ 643704 (+) True LOC120555115
TU322799 other downstream 64394 624054 ~ 643661 (+) False G237621

Expression Profile