RNA id: unassigned_transcript_1759


Basic Information

Item Value
RNA id unassigned_transcript_1759
length 966
RNA type V_gene_segment
GC content 0.52
exon number 4
gene id LOC120555115
representative True

Chromosome Information

Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 609931 ~ 643704 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

atgactttgatctccgtcctcatctggactctcctctgctgctgcttcacagagtccagaggccaggtcacagtgactcagcctggagcagtgagctctgctctgggaggctccgtctccatcagctgtaggaccagTCAGGATGTTTATGTTTCGAGCAGCTACCACAGATTAGCctggtaccaacagagagatggagaaactcctAAACTGCTCATTAGCTCTGCTACTTATCGAAAATCAGGGATTCCAGatcgttttacaggcagtggatcaaactctgacttcactctgaccatcagtggagtccagactgaagatgcagcagtttactactgtcagagtTATCATGAAATCAACAGTCAGGgtgtgtgGACTTTTggtggaggaaccagactgaatgttggaaGTGATGTCCGTCCCACCCTGACGGTGCTGCCCCCCTCCAGTGAGGAGCTGCTGAAGGGGAAGGCCACACTCATGTGCCTGGCCAACAAGGGCTTCCCCTCAGACTGGAGTCTGGCCTGGAAGGtggacggcagcagcagcagcagctgggaggagagcaggagcCCCGGGGTGCTGGGGAAGGACGGCAAATACAGCTGGAGCAGCACCCTGAGGCTCCCTAAAGACCAGTGGGAGAAGGTGGGCTCTGTGACCTGTGAGGCCACCCAGGGCTCCCAGACTCCGctctcagagacactgaggagagaCCAGTGTTCCCAGTCCTGACCTGACTCACTGGGACTCTGCTACTGGTTTCACTCTGATACTGATCTCAGTCTGCTCTctgctactctctctctctctctctctctctctctctctctctctctctctctctctctctctctttctggcaTCAGACCAATTTAACAGTGTTCAACTTGAAATAgcaatgttttatttgttgcaATAATCCTTATGCTGTTAATGCTGtaagacaataaaacatgattCATA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU322886 lncRNA upstream 1071 594544 ~ 616711 (+) True G237643
TU322800 lncRNA upstream 19601 554238 ~ 598181 (+) False G237621
TU322868 lncRNA upstream 28656 542751 ~ 589126 (+) True G237629
TU322944 lncRNA upstream 58122 500627 ~ 559660 (+) True G237697
XR_005638643.1 lncRNA upstream 81423 512012 ~ 536359 (+) True LOC120555180
unassigned_transcript_1758 other upstream 3673 613441 ~ 614109 (+) True LOC120555137
unassigned_transcript_1756 other upstream 79295 537575 ~ 538487 (+) True LOC120555128
unassigned_transcript_1755 other upstream 83066 534212 ~ 534716 (+) True LOC120555160
unassigned_transcript_1753 other upstream 104895 512218 ~ 512887 (+) True LOC120555141
unassigned_transcript_1752 other upstream 134920 482243 ~ 482862 (+) True LOC120555140

Expression Profile