RNA id: TU323006


Basic Information

Item Value
RNA id TU323006
length 787
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G237710
representative False

Chromosome Information

Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 36391 ~ 665977 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TcattttggtgagtttgtttgtgtcaaagtcagagagccgtgtctctctacagtgagaggtttttgtacggCGGCTCAATGcctttgtatcactgtggtgGACTTTTggtggaggaaccagactgaATGTTGGAAGTGATGTCCGTCCAACCCTGACGGTGCTGCCCCCCTCCAGTAAGGAGCTGCTGCAGGGGAAGGCCACGCTCATGTGCCTGGCCAACAAGGGCTTCCCCTCAGACTGGAGTCTGGCCTGGAAGGGGTGgaccggcagcagcagcagcagctgggaggagagcaggCCCCCCGGGTGCTGGGGAAGGACGGCAAATACAGCTGGAGCAGCACCCTGAGGCTCCCTAAAGACCAGTGGGAGAAGGTGGGCTCTGTGACCTGTGAGGCCACCCAGGGCTCCCAGACTCCGccctcagagacactgaggagagaCCAGTGTTCCCAGTCCTGACCTGACTCACTGGGACTCTGCTACTGGTTTCACTCTGATACTGGTCTCAGTCTGCTCTctgctactctctctctctctctctctctctctctctctctctctctctctctctctctctctttctctctctgtttatctcTTTCCCTCACTCACTGTCTAACTACATGTTTCATTGATTAagtgtgttgcatgttttaattttgattattttaacaCAATAAAGTACTTTTCATCAAATCAGTTGTTTCCATGTCTGTTATTGTAAAAGAAACAGATATGTCTGCCTTAATAGTTCCATAAATCTAGAAATGTTAAACTCAACTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU323005 lncRNA downstream 27355 344046 ~ 352449 (-) False G237710
TU323106 lncRNA downstream 92068 248799 ~ 287736 (-) True G237746
TU323028 lncRNA downstream 98722 215535 ~ 281082 (-) False G237710
TU323020 lncRNA downstream 98722 242110 ~ 281082 (-) False G237710
TU323086 lncRNA downstream 104262 183399 ~ 275542 (-) True G237728
TU323080 lncRNA upstream 7938 389701 ~ 438619 (-) True G237722
TU323038 lncRNA upstream 62264 444027 ~ 573859 (-) False G237710
TU323053 lncRNA upstream 62264 444027 ~ 515943 (-) False G237710
TU323117 lncRNA upstream 80810 462573 ~ 559468 (-) True G237755
TU323001 lncRNA upstream 82527 464290 ~ 573859 (-) False G237710
TU322993 other downstream 13046 318928 ~ 366758 (-) False G237710
unassigned_transcript_1742 other downstream 13923 365399 ~ 365881 (-) True LOC120555105
TU322992 other downstream 34090 245310 ~ 345714 (-) False G237710
TU322962 other downstream 34160 344046 ~ 345644 (-) False G237710
unassigned_transcript_1738 other downstream 34212 344138 ~ 345592 (-) True LOC120555161
unassigned_transcript_1746 other upstream 9914 391677 ~ 393137 (-) True LOC120555169
TU322970 other upstream 9932 391695 ~ 393212 (-) False G237710
TU322991 other upstream 24124 405887 ~ 454641 (-) False G237710
unassigned_transcript_1747 other upstream 24136 405899 ~ 407410 (-) True LOC120555171
TU322974 other upstream 71474 453237 ~ 466306 (-) False G237710

Expression Profile