RNA id: TU323009


Basic Information

Item Value
RNA id TU323009
length 916
lncRNA type inter_gene
GC content 0.51
exon number 4
gene id G237710
representative False

Chromosome Information

Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 36391 ~ 665977 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

agctgtccttcatgacaacagaagacacagaaatcctcctcatcaaaaacatgactttgatctccgtcctcatctggactctcctctgctgctgcttcacagagtccagcGGTCAGTacacagtgactcagcctggagcagtgagctctgctctggaggctccgtctccatcagctgtaggaccagTCAGAGGGTTTATGGTACCTACGAGTTAGCctggtaccaacagagagatggagaaactcctAAACGGCTCATTTACTATGCTAGCACTCGACAATCAGGGATTCCAGATCGTTTAtacaggcagtggatcaaactctgacttcactctgaccatcagtggagtccagactgaagatgcagcagtttactactgtcagagtCTTCACATTCCCAACAGCCAGTGGgttGACTTTTggtggaggaaccagactgaATGTTGGAAGTGATGTCCGCCCCACCCTGACGGTGCTGCCCCCTCCAGTGATGAGCTGCTGAAGGGGAAGGCCACGCTCATGTGCCTGGCCAACAAGGGCTTCCCCTCAGACTGGAGTCTGGCCTGGAAGGtggacggcagcagcagcagcagcagctgggaggagagcaggagcCCCGGGGTGCTGGGGAAGGACGGCAAATACAGCTGGAGCAGCACCCTGAGGCTCCCCTAAAGACCAGTGGGAGAAGGTGTGCTCTGTGACCTGTGAGGCCACCCAGGGCTCCCAGACTCCActctcagagacactgaggagagaCCAGTGTTCCCAGTCCTGACCTGACTCACTGGGACTCTGCTACTGGTTTCACTCTGATACTGATCTCAGTCTGCTCTCTGctactctctttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttcttat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU323120 lncRNA downstream 20366 589334 ~ 595315 (-) True G237758
TU323077 lncRNA downstream 26571 581119 ~ 589110 (-) True G237720
TU323038 lncRNA downstream 41822 444027 ~ 573859 (-) False G237710
TU323001 lncRNA downstream 41822 464290 ~ 573859 (-) False G237710
TU323117 lncRNA downstream 56213 462573 ~ 559468 (-) True G237755
TU323052 other downstream 19550 49467 ~ 596131 (-) False G237710
TU323051 other downstream 92735 514308 ~ 522946 (-) False G237710
unassigned_transcript_1754 other downstream 101018 514303 ~ 514663 (-) True LOC120555167
TU322974 other downstream 149375 453237 ~ 466306 (-) False G237710
unassigned_transcript_1751 other downstream 150875 464302 ~ 464806 (-) True LOC120555176
unassigned_transcript_1761 other upstream 3407 669384 ~ 670083 (-) True LOC120555151
unassigned_transcript_1762 other upstream 6914 672891 ~ 673378 (-) True LOC120555112
unassigned_transcript_1763 other upstream 12308 678285 ~ 678896 (-) True LOC120555142

Expression Profile