RNA id: TU323063


Basic Information

Item Value
RNA id TU323063
length 834
RNA type TUCP
GC content 0.53
exon number 3
gene id LOC120555092
representative False

Chromosome Information

Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 14754 ~ 137724 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gctttatgtttttgtctctgtatcctcagagtccagaggccaggtcacagtgactcagcctggagcagtgagctctgctctgggaggctccgtctccatcagctgtaggaccagTCAGGCTGTTACACACATTAACTATCTAGAGtggtaccaacagagagatggagaaactcctAAACTGCTCATTTACTATACTAGCACTCGACAATCAGGGATTCCAGatcgttttacaggcagtggatcaaactctgacttcactctgaccatcagtggagtccagactgaagatgcagcagtttactactgtcagagtTATCACAGTGGGGgtgtgttGACTTTTggtggaggaaccagactgaATGTTGGAAGTGATGTCCGTCCCACCCTGACGGTGCTGCCCCCCTCCAGTGATGAGCTGCTGCAGGGGAAGGCCACGCTCATGTGCCTGGCCAACAAGGGCTTCCCCTCAGACTGGAGTCTGGCCTGGAAGGtggacggcagcagcagcagcagcagctgggaggagagcaggagcCCCGGGGTGCTGGGGAAGGACGGCAAATACAGCTGGAGCAGCACCCTGAGGCTCCCTAAAGACCAGTGGGAGAAGGTGGGCTCTGTGACCTGTGAGGCCACCCAGGGCTCCCAGACTCCActctcagagacactgaggagagaCCAGTGTTCCCAGTCCTGACCTGACTCACTGGGACTCTGCTACTGGTTTCACTCTGATACTGATCTCAGTCTGCTctctgctatttttttttttttttttttctctctctctctctctctctctctctctctctctctctgtttatctcTTTCCCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU323068 lncRNA upstream 33465 124323 ~ 139783 (-) True G237715
TU323034 lncRNA upstream 47105 137963 ~ 173081 (-) False G237710
TU323002 lncRNA upstream 52637 143495 ~ 158850 (-) False G237710
TU323086 lncRNA upstream 92541 183399 ~ 275542 (-) True G237728
TU323090 lncRNA upstream 122884 213742 ~ 634824 (-) True G237732
unassigned_transcript_1707 other upstream 45882 136740 ~ 137724 (-) True LOC120555092
TU323032 other upstream 60282 151140 ~ 246759 (-) False G237710
unassigned_transcript_1709 other upstream 65521 156379 ~ 156833 (-) True LOC120555163
TU322971 other upstream 65528 156386 ~ 158340 (-) False G237710
TU323047 other upstream 65528 156386 ~ 281082 (-) False G237710

Expression Profile


Homologous

species RNA id representative length rna type GC content exon number chromosome id location
eurasian perch (Perca fluviatilis) TU113217 False 553 lncRNA 0.48 3 NC_053119.1 11986609 ~ 12020334 (+)
bowfin (Amia calva) TU113217 False 994 lncRNA 0.47 4 CM030131.1 7030773 ~ 7184824 (-)