RNA id: TU323080


Basic Information

Item Value
RNA id TU323080
length 514
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G237722
representative True

Chromosome Information

Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 389701 ~ 438619 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTCactctgacagtagtaaactgctgcatcttcagtctggactccactgatggtcagagtgaagtcagagtttgatccactgcctgtaaaacgatCTGGAATCCCTGATTTTCGAGTGCTAGCATAGTAAATGAGCAGTTTaggagtttctccatctctctgttggtaccagGCTAATCTCTGGGAGGTGCTCCCACCATAAACCCTCTGActggtcctacagctgatggagacggagcctcccagagcagagctcactgctccaggctgagtcactgtgacctggcctctggactctgaggatacagagacaaaaacataaagcagcgtcacggtttagtcggcttcatttcagagggacggatgttgatagaggagaggagtttgattctctggactttacctgtgaagcagcagcagaggagagtccagatgaggacggagatcaaagtcatgtttttgatgaggaggatttctgtgtcttctgttgtcatgaaggacagctgtcagtcat

Function

GO: NA

KEGG:

id description
ko04145 Phagosome
ko05140 Leishmaniasis

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU323006 lncRNA downstream 7938 379804 ~ 381763 (-) False G237710
TU323005 lncRNA downstream 37252 344046 ~ 352449 (-) False G237710
TU323106 lncRNA downstream 101965 248799 ~ 287736 (-) True G237746
TU323028 lncRNA downstream 108619 215535 ~ 281082 (-) False G237710
TU323020 lncRNA downstream 108619 242110 ~ 281082 (-) False G237710
TU323038 lncRNA upstream 5408 444027 ~ 573859 (-) False G237710
TU323053 lncRNA upstream 5408 444027 ~ 515943 (-) False G237710
TU323117 lncRNA upstream 23954 462573 ~ 559468 (-) True G237755
TU323001 lncRNA upstream 25671 464290 ~ 573859 (-) False G237710
TU323046 lncRNA upstream 44996 483615 ~ 544002 (-) False G237710
TU322972 other downstream 7938 245310 ~ 381763 (-) False G237710
TU322993 other downstream 22943 318928 ~ 366758 (-) False G237710
unassigned_transcript_1742 other downstream 23820 365399 ~ 365881 (-) True LOC120555105
TU322992 other downstream 43987 245310 ~ 345714 (-) False G237710
TU322962 other downstream 44057 344046 ~ 345644 (-) False G237710
TU322974 other upstream 14618 453237 ~ 466306 (-) False G237710
TU322975 other upstream 14618 453237 ~ 454979 (-) False G237710
TU323030 other upstream 14618 453237 ~ 454979 (-) False G237710
unassigned_transcript_1751 other upstream 25683 464302 ~ 464806 (-) True LOC120555176
TU323036 other upstream 75531 514150 ~ 622919 (-) False G237710

Expression Profile