RNA id: unassigned_transcript_1745



Basic Information


Item Value
RNA id unassigned_transcript_1745
length 384
RNA type V_gene_segment
GC content 0.50
exon number 2
gene id LOC120555107
representative True

Chromosome Information


Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 389760 ~ 390250 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


atgactttgatctccgtcctcatctggactctcctctgctgctgcttcacagagtccagaggccaggtcacagtgactcagcctggagcagtgagctctgctctgggaggctccgtctccatcagctgtaggaccagTCAGAGGGTTTATGGTGGGAGCACCTCCCAGAGATTAGCctggtaccaacagagagatggagaaactcctAAACTGCTCATTTACTATGCTAGCACTCGACAATCAGGGATTCCAGatcgttttacaggcagtggatcaaactctgacttcactctgaccatcagtggagtccagactgaagatgcagcagtttactactgtcagagtTATCATGAAATCAACAGTCAGGatgtgttcacacagtga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU322895 lncRNA upstream 10806 378434 ~ 378954 (+) False LOC120555106
TU322858 lncRNA upstream 72981 262995 ~ 316779 (+) True G237624
TU322857 lncRNA upstream 83548 275032 ~ 306212 (+) False G237624
TU322833 lncRNA upstream 109553 245238 ~ 280207 (+) False G237623
TU322838 lncRNA upstream 130515 245238 ~ 259245 (+) False G237623
TU322871 lncRNA downstream 3705 393955 ~ 394462 (+) True G237631
TU322878 lncRNA downstream 29647 419897 ~ 420275 (+) True G237637
TU322943 lncRNA downstream 52618 442868 ~ 448687 (+) True G237696
TU322828 lncRNA downstream 74043 464293 ~ 484541 (+) False G237623
TU322834 lncRNA downstream 74043 464293 ~ 484143 (+) False G237623
unassigned_transcript_1744 other upstream 10713 376531 ~ 379047 (+) True LOC120555106
unassigned_transcript_1743 other upstream 21928 367324 ~ 367832 (+) True LOC120555123
unassigned_transcript_1741 other upstream 25397 363742 ~ 364363 (+) True LOC120555138
unassigned_transcript_1740 other upstream 35091 354197 ~ 354669 (+) True LOC120555104
unassigned_transcript_1739 other upstream 42992 346296 ~ 346768 (+) True LOC120555103
unassigned_transcript_1748 other downstream 17842 408092 ~ 408573 (+) True LOC120555108
unassigned_transcript_1749 other downstream 34142 424392 ~ 424873 (+) True LOC120555110
unassigned_transcript_1750 other downstream 60771 451021 ~ 451936 (+) True LOC120555146
TU322887 other downstream 91985 482235 ~ 482852 (+) False LOC120555140
unassigned_transcript_1752 other downstream 91993 482243 ~ 482862 (+) True LOC120555140

Expression Profile