RNA id: unassigned_transcript_1749



Basic Information


Item Value
RNA id unassigned_transcript_1749
length 375
RNA type V_gene_segment
GC content 0.47
exon number 2
gene id LOC120555110
representative True

Chromosome Information


Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 424392 ~ 424873 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


atgactttgatctccgtcctcatctggactctcctctgctgctgcttcacagagtccagaggccaggtcacagtgactcagcctggagcagtgagctctgctctgggaggctccatctccatcagctgtaggaccagTCAGAAGATAGAAAATATTTACAGGTTAGCCTGGTatcaacagagagatggagaaactcctAAACTGCTCATTTACTATACTAGCACTCGACAATTAGGGATTCCAGatcgttttacaggcagtggatcaaactctgacttcactctgaccatcagtggagtccagactgaagatgcagcagtttactactgtcagagtTTTCATGAAATCAACAGTCAgtatgtgttcacacagtga

Function


GO: NA

KEGG:

id description
K06553 VPREB, CD179a; pre-B lymphocyte gene

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU322878 lncRNA upstream 4117 419897 ~ 420275 (+) True G237637
TU322871 lncRNA upstream 29930 393955 ~ 394462 (+) True G237631
TU322895 lncRNA upstream 45438 378434 ~ 378954 (+) False LOC120555106
TU322858 lncRNA upstream 107613 262995 ~ 316779 (+) True G237624
TU322857 lncRNA upstream 118180 275032 ~ 306212 (+) False G237624
TU322943 lncRNA downstream 17995 442868 ~ 448687 (+) True G237696
TU322828 lncRNA downstream 39420 464293 ~ 484541 (+) False G237623
TU322834 lncRNA downstream 39420 464293 ~ 484143 (+) False G237623
TU322809 lncRNA downstream 55494 480367 ~ 534717 (+) False G237621
TU322798 lncRNA downstream 62951 487824 ~ 651704 (+) False G237621
unassigned_transcript_1748 other upstream 15819 408092 ~ 408573 (+) True LOC120555108
unassigned_transcript_1745 other upstream 34142 389760 ~ 390250 (+) True LOC120555107
unassigned_transcript_1744 other upstream 45345 376531 ~ 379047 (+) True LOC120555106
unassigned_transcript_1743 other upstream 56560 367324 ~ 367832 (+) True LOC120555123
unassigned_transcript_1741 other upstream 60029 363742 ~ 364363 (+) True LOC120555138
unassigned_transcript_1750 other downstream 26148 451021 ~ 451936 (+) True LOC120555146
TU322887 other downstream 57362 482235 ~ 482852 (+) False LOC120555140
unassigned_transcript_1752 other downstream 57370 482243 ~ 482862 (+) True LOC120555140
unassigned_transcript_1753 other downstream 87345 512218 ~ 512887 (+) True LOC120555141
unassigned_transcript_1755 other downstream 109339 534212 ~ 534716 (+) True LOC120555160

Expression Profile