RNA id: TCONS_00007131


Basic Information

Item Value
RNA id TCONS_00007131
length 115
RNA type rRNA
GC content 0.56
exon number 1
gene id XLOC_003670
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 40889180 ~ 40889294 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gccggcagctagctctctgcaactttcacaaggttgcccactgaagctaagcagggctgcacccagtcagtacctggatgggataccacatgggaaagctaggttgctggtggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000181676

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008675 lncRNA upstream 23638 40864955 ~ 40865542 (+) True XLOC_003669
TCONS_00007123 lncRNA upstream 286093 40597563 ~ 40603087 (+) True XLOC_003664
TCONS_00008674 lncRNA upstream 455100 40220055 ~ 40434080 (+) True XLOC_003662
TCONS_00008673 lncRNA upstream 772534 40111481 ~ 40116646 (+) True XLOC_003659
TCONS_00007113 lncRNA upstream 890382 39993997 ~ 39998798 (+) True XLOC_003657
TCONS_00008676 lncRNA downstream 2387 40891681 ~ 40932395 (+) False XLOC_003671
TCONS_00008677 lncRNA downstream 2387 40891681 ~ 40950147 (+) False XLOC_003671
TCONS_00007132 lncRNA downstream 6400 40895694 ~ 40905200 (+) False XLOC_003671
TCONS_00007133 lncRNA downstream 8032 40897326 ~ 40899889 (+) True XLOC_003672
TCONS_00008678 lncRNA downstream 12824 40902118 ~ 40932395 (+) False XLOC_003671
TCONS_00007129 mRNA upstream 41565 40812590 ~ 40847615 (+) False XLOC_003668
TCONS_00007130 mRNA upstream 45154 40831620 ~ 40844026 (+) True XLOC_003668
TCONS_00007125 mRNA upstream 215110 40649412 ~ 40674070 (+) False XLOC_003667
TCONS_00007126 mRNA upstream 215110 40649413 ~ 40674070 (+) False XLOC_003667
TCONS_00007128 mRNA upstream 225942 40657612 ~ 40663238 (+) True XLOC_003667
TCONS_00007134 mRNA downstream 175528 41064822 ~ 41067789 (+) True XLOC_003673
TCONS_00007135 mRNA downstream 200280 41089574 ~ 41104643 (+) False XLOC_003674
TCONS_00007136 mRNA downstream 201146 41090440 ~ 41105632 (+) True XLOC_003674
TCONS_00007138 mRNA downstream 245761 41135055 ~ 41157954 (+) False XLOC_003675
TCONS_00007143 mRNA downstream 353350 41242644 ~ 41372948 (+) False XLOC_003678
TCONS_00007127 other upstream 233309 40649471 ~ 40655871 (+) False XLOC_003667
TCONS_00007097 other upstream 2085442 38803611 ~ 38803738 (+) True XLOC_003642
TCONS_00007094 other upstream 2300614 38588451 ~ 38588566 (+) True XLOC_003640
TCONS_00007079 other upstream 3238216 37638982 ~ 37650964 (+) False XLOC_003630
TCONS_00007137 other downstream 221375 41110669 ~ 41157928 (+) False XLOC_003675
TCONS_00007139 other downstream 246315 41135609 ~ 41157926 (+) True XLOC_003675
TCONS_00007149 other downstream 575813 41465107 ~ 41465236 (+) True XLOC_003680
TCONS_00007172 other downstream 1736077 42625371 ~ 42625487 (+) True XLOC_003703
TCONS_00007182 other downstream 2155532 43044826 ~ 43044949 (+) True XLOC_003709