RNA id: TU33462


Basic Information

Item Value
RNA id TU33462
length 523
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id LOC120555975
representative False

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 765198 ~ 774698 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtAACCAAGGTTAAAAATCTATATTAAGAGCTAAGTTTATATTAAAAAGTCAATTCATTCAGTAtgttattaatgttaaagattaaaaacatatttgtctAAAAACCAATTCAaatgtgagagaaaataaataggAAGTTTATTTTGAAGGAGGTGGGTTGGGGACGTGCTGTCAGCCAATCAGGAAGAAGCTCGGACTGTTGACCTGCACGGAGCAGAGTTCACTTCCCCTTGAGCTGTTGGAAGAACAGAGAGCAAACCCCGCGTCGAACGATACCTACCTCGTCAAGACATTCCAATAAAAGTTGTTAAAACTCGGATTAAAAACTCTTAAAACAATCCAGTGTGGAGCCCTGGACCTGTGAGAGTGCAGCCGGAGAGAACGGACGTGTCCCTCACGAAGAAAACGCATCGGTCAGGTTTTTTTGTTGGACCCTTTGAACCTTTGATCTACCTGGATGTTGGAGCCTGGATCGAGATATTGATGGCGAGCCGCAGCCCAGAGGAGAACTAGAGATACG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU33457 lncRNA upstream 68614 695992 ~ 696584 (+) True G24866
TU33448 lncRNA upstream 214810 550098 ~ 550388 (+) True G24858
TU33447 lncRNA upstream 227066 537689 ~ 538132 (+) True G24857
TU33446 lncRNA upstream 229603 535326 ~ 535595 (+) True G24856
TU33305 lncRNA upstream 653521 109829 ~ 111677 (+) True G24752
TU33464 lncRNA downstream 7141 773431 ~ 774698 (+) False LOC120555975
XR_005638779.1 lncRNA downstream 7145 773435 ~ 774555 (+) False LOC120555975
TU33490 lncRNA downstream 180507 946797 ~ 947060 (+) True G24890
TU33530 lncRNA downstream 367771 1134061 ~ 1134602 (+) True G24923
TU33522 lncRNA downstream 399359 1165649 ~ 1169695 (+) True G24918
XM_039795949.1 mRNA upstream 294468 355665 ~ 470730 (+) False LOC120556381
XM_039794679.1 mRNA downstream 264064 1030354 ~ 1037493 (+) True mrps11
XM_039794250.1 mRNA downstream 337307 1103597 ~ 1163018 (+) False kif13ba
XM_039794249.1 mRNA downstream 337332 1103622 ~ 1163018 (+) False kif13ba
XM_039794252.1 mRNA downstream 337344 1103634 ~ 1163018 (+) False kif13ba
XM_039794257.1 mRNA downstream 337424 1103714 ~ 1163018 (+) False kif13ba
TU33826 other downstream 1073043 1839333 ~ 1842811 (+) True G25173
TU33868 other downstream 1315668 2081958 ~ 2083319 (+) True G25204
TU34144 other downstream 3018643 3784933 ~ 3785542 (+) True G25431
TU34243 other downstream 3804083 4570373 ~ 4575645 (+) True G25512
TU34491 other downstream 5267919 6034209 ~ 6035193 (+) True G25708

Expression Profile