RNA id: TU33606


Basic Information

Item Value
RNA id TU33606
length 298
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G24984
representative True

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 1258519 ~ 1258816 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GATATTCAAAAACAATACATCTGTGCGTTCACTGGATCCAGCTGAATCACGTGGTATAGGCCACGCctatttccgcctagacttttatgcgtgaaaaatcgcgATTTATTGTAAACCTGCTTTTTCGTACTCCTCCTAGACCGCGCAACCGATCTGCATGAAACTTGGTAGGTAGCCTCTCCAgaccgacctgacaaaaagttatcaaaagaagtTTTGTCGGATGAAAATTTCGTGAATTAAGCACAACgaaatttgtgtagctagctacaaagacacaaacattgCAATATCTCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU33594 lncRNA upstream 3928 1253197 ~ 1254591 (+) True G24972
TU33533 lncRNA upstream 73292 1184725 ~ 1185227 (+) True G24926
TU33526 lncRNA upstream 80338 1175326 ~ 1178181 (+) True G24920
TU33522 lncRNA upstream 88824 1165649 ~ 1169695 (+) True G24918
TU33530 lncRNA upstream 123917 1134061 ~ 1134602 (+) True G24923
TU33613 lncRNA downstream 43903 1302719 ~ 1302952 (+) True G24991
TU33637 lncRNA downstream 127232 1386048 ~ 1386264 (+) True G25011
TU33634 lncRNA downstream 154279 1413095 ~ 1415747 (+) True G25008
TU33792 lncRNA downstream 510466 1769282 ~ 1774440 (+) True G25144
TU33862 lncRNA downstream 923990 2182806 ~ 2183770 (+) True G25203
XM_039793914.1 mRNA upstream 6618 1246885 ~ 1251901 (+) True LOC120555232
XM_039793907.1 mRNA upstream 18062 1228417 ~ 1240457 (+) True glo1
XM_039793897.1 mRNA upstream 30861 1204494 ~ 1227658 (+) True eprs1
XM_039793904.1 mRNA upstream 30861 1204494 ~ 1227658 (+) False eprs1
XM_039794256.1 mRNA upstream 95501 1103716 ~ 1163018 (+) False kif13ba
XM_039794041.1 mRNA downstream 4134 1262950 ~ 1269003 (+) True LOC120555381
XM_039794042.1 mRNA downstream 4134 1262950 ~ 1269003 (+) False LOC120555381
XM_039794192.1 mRNA downstream 50006 1308822 ~ 1311760 (+) True LOC120555491
XM_039795697.1 mRNA downstream 53632 1312448 ~ 1364726 (+) True LOC120556244
XM_039796055.1 mRNA downstream 119194 1378010 ~ 1385075 (+) True LOC120556440
TU33826 other downstream 580517 1839333 ~ 1842811 (+) True G25173
TU33868 other downstream 823142 2081958 ~ 2083319 (+) True G25204
TU34144 other downstream 2526117 3784933 ~ 3785542 (+) True G25431
TU34243 other downstream 3311557 4570373 ~ 4575645 (+) True G25512
TU34491 other downstream 4775393 6034209 ~ 6035193 (+) True G25708

Expression Profile