Item | Value |
---|---|
RNA id | TU33989 |
length | 838 |
lncRNA type | inter_gene |
GC content | 0.58 |
exon number | 3 |
gene id | LOC120555484 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_053114.1 |
NCBI id | CM020911.1 |
chromosome length | 46923577 |
location | 3309375 ~ 3379915 (+) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
species | eurasian perch (Perca fluviatilis) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU33995 | lncRNA | upstream | 659 | 3309375 ~ 3313695 (+) | True | LOC120555484 |
TU33966 | lncRNA | upstream | 173967 | 3139689 ~ 3140387 (+) | True | G25288 |
TU33958 | lncRNA | upstream | 342444 | 2971607 ~ 2971910 (+) | True | G25281 |
TU33956 | lncRNA | upstream | 344096 | 2969770 ~ 2970258 (+) | True | G25279 |
TU33937 | lncRNA | upstream | 596894 | 2717070 ~ 2717460 (+) | True | G25262 |
TU34004 | lncRNA | downstream | 43199 | 3361143 ~ 3435233 (+) | True | G25316 |
XR_005638718.1 | lncRNA | downstream | 64712 | 3382656 ~ 3388513 (+) | True | LOC120555485 |
XR_005638719.1 | lncRNA | downstream | 70578 | 3388522 ~ 3389725 (+) | True | LOC120555486 |
XR_005638720.1 | lncRNA | downstream | 95068 | 3413012 ~ 3414535 (+) | True | LOC120555487 |
TU34083 | lncRNA | downstream | 145113 | 3463057 ~ 3463523 (+) | True | G25380 |
XM_039794180.1 | mRNA | upstream | 8866 | 3280076 ~ 3305488 (+) | True | slc7a6 |
XM_039794181.1 | mRNA | upstream | 8866 | 3280078 ~ 3305488 (+) | False | slc7a6 |
XM_039795613.1 | mRNA | upstream | 41176 | 3250608 ~ 3273178 (+) | False | adgrg1 |
XM_039795099.1 | mRNA | downstream | 103259 | 3421203 ~ 3422406 (+) | True | LOC120555909 |
XM_039794972.1 | mRNA | downstream | 163353 | 3481297 ~ 3518086 (+) | True | mmp15b |
XM_039794595.1 | mRNA | downstream | 305690 | 3623634 ~ 3724143 (+) | True | mtss1lb |
XM_039794599.1 | mRNA | downstream | 305690 | 3623634 ~ 3724143 (+) | False | mtss1lb |
XM_039794597.1 | mRNA | downstream | 305690 | 3623634 ~ 3724143 (+) | False | mtss1lb |
TU33868 | other | upstream | 1231035 | 2081958 ~ 2083319 (+) | True | G25204 |
TU33826 | other | upstream | 1471543 | 1839333 ~ 1842811 (+) | True | G25173 |
TU34144 | other | downstream | 466989 | 3784933 ~ 3785542 (+) | True | G25431 |
TU34243 | other | downstream | 1252429 | 4570373 ~ 4575645 (+) | True | G25512 |
TU34491 | other | downstream | 2716265 | 6034209 ~ 6035193 (+) | True | G25708 |
unassigned_transcript_138 | other | downstream | 2733943 | 6051887 ~ 6051969 (+) | True | trnal-uaa |
unassigned_transcript_139 | other | downstream | 2734871 | 6052815 ~ 6052897 (+) | True | trnal-uaa_1 |