RNA id: TU35084


Basic Information

Item Value
RNA id TU35084
length 326
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G26206
representative True

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 8761965 ~ 8762290 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CCGTCTCTCAGTCCACTGACGTAGTTGTCGATCTGTGCAGGGATTCCCTGTAAGATGGAGTTCCGGAAGCCTTTGTTCTCCACCACATTCCCATCATGCCCGTCGATCACTGTCAGCTGCACCCCGTCTTCTGGTTGGTACAACTTCCTGCCGTTTACCTGTCACAACAGAGCCGGCCAATCactttatatagcacttttaagACAAAATGGGGTTCAATTTGCTTTATCAAAATAGAAGACTAAGGCAGTATTCCTCaaagtcaattcaattcaattgtatttatagtgtcaaatcataaccgTCTCAAAGAGTGGTCCAATGGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005638723.1 lncRNA upstream 263109 8497892 ~ 8498856 (+) True LOC120555519
TU34966 lncRNA upstream 391140 8370582 ~ 8370825 (+) True G26098
TU34964 lncRNA upstream 482906 8278307 ~ 8279059 (+) True G26096
TU34963 lncRNA upstream 496800 8264932 ~ 8265165 (+) True G26095
TU34961 lncRNA upstream 498022 8263701 ~ 8263943 (+) True G26093
TU35085 lncRNA downstream 4272 8766562 ~ 8766987 (+) True G26207
TU35086 lncRNA downstream 4746 8767036 ~ 8767243 (+) True G26208
TU35088 lncRNA downstream 10790 8773080 ~ 8773325 (+) True G26210
TU35089 lncRNA downstream 13157 8775447 ~ 8775662 (+) True G26211
TU35096 lncRNA downstream 50538 8812828 ~ 8813032 (+) True G26216
XM_039794377.1 mRNA upstream 11085 8745162 ~ 8750880 (+) True mesd
XM_039795650.1 mRNA upstream 140253 8604276 ~ 8621712 (+) True stard5
XM_039796113.1 mRNA upstream 160287 8547187 ~ 8601678 (+) False LOC120556467
XM_039796111.1 mRNA upstream 160288 8547187 ~ 8601677 (+) True LOC120556467
XM_039796112.1 mRNA upstream 160288 8559214 ~ 8601677 (+) False LOC120556467
XM_039795212.1 mRNA downstream 294043 9056333 ~ 9091510 (+) True abhd17c
XM_039796102.1 mRNA downstream 498921 9261211 ~ 9296717 (+) True LOC120556464
XM_039795961.1 mRNA downstream 570939 9333229 ~ 9378611 (+) False cers3a
XM_039795962.1 mRNA downstream 570939 9333229 ~ 9378611 (+) False cers3a
XM_039795147.1 mRNA downstream 628818 9391108 ~ 9604462 (+) True adamts17
TU35083 other upstream 1664 8753701 ~ 8760301 (+) True G26205
TU34538 other upstream 2472189 6288190 ~ 6289776 (+) False LOC120555541
TU34541 other upstream 2472189 6289056 ~ 6289776 (+) False LOC120555541
TU34546 other upstream 2473888 6287048 ~ 6288077 (+) True G25743
TU34539 other upstream 2495257 6264974 ~ 6266708 (+) True LOC120555541
TU35121 other downstream 306439 9068729 ~ 9155343 (+) True G26236
TU35242 other downstream 804541 9566831 ~ 9604436 (+) False adamts17
TU35313 other downstream 1084987 9847277 ~ 9860000 (+) True aldh1a3
XR_005638880.1 other downstream 3269331 12031621 ~ 12031728 (+) True LOC120556595
TU36106 other downstream 4347467 13109757 ~ 13110339 (+) True G27086

Expression Profile