RNA id: TU35379



Basic Information


Item Value
RNA id TU35379
length 246
lncRNA type inter_gene
GC content 0.59
exon number 1
gene id G26455
representative True

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 10102920 ~ 10103165 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


caagaaggccgaatactccgaactcttgtttggtgcatatgcacaaacaacagtcagagttttcccccccacaacccgcaggcgtagggaggcgaccctctcgtccaccggggtaaactccaacatagcggcgctcagccgggggcttgtgagtatccccacacccgcccggcgcctcacaccctgggcaactccggagaagaaaagagtccaacccctatccaggagtatggttccagaaccgag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU35378 lncRNA downstream 1353 10100237 ~ 10101567 (-) True G26454
TU35307 lncRNA downstream 324198 9778274 ~ 9778722 (-) True G26390
TU35302 lncRNA downstream 365874 9736811 ~ 9737046 (-) True G26385
TU35300 lncRNA downstream 375140 9727192 ~ 9727780 (-) True G26383
TU35298 lncRNA downstream 408040 9694535 ~ 9694880 (-) True G26381
TU35385 lncRNA upstream 19233 10122398 ~ 10122609 (-) True G26461
TU35391 lncRNA upstream 23665 10126830 ~ 10127190 (-) True G26467
TU35443 lncRNA upstream 212403 10315568 ~ 10316079 (-) True G26506
TU35444 lncRNA upstream 213583 10316748 ~ 10317126 (-) True G26507
TU35448 lncRNA upstream 261655 10364820 ~ 10365176 (-) True G26510
XM_039795797.1 mRNA downstream 777632 9308597 ~ 9325288 (-) True fah
XM_039794771.1 mRNA downstream 873343 9155261 ~ 9229577 (-) False arnt2
XM_039794769.1 mRNA downstream 873347 9153242 ~ 9229573 (-) True arnt2
XM_039794379.1 mRNA downstream 1162362 8759601 ~ 8940558 (-) True LOC120555589
XM_039795210.1 mRNA upstream 24813 10127978 ~ 10231722 (-) True chsy1
XM_039795882.1 mRNA upstream 130299 10233464 ~ 10241227 (-) True selenos
XM_039796025.1 mRNA upstream 140959 10244124 ~ 10245386 (-) True zgc:113274
XM_039795220.1 mRNA upstream 156066 10259231 ~ 10292924 (-) True snrpa1
XM_039795490.1 mRNA upstream 537773 10640938 ~ 10731901 (-) False ano9b
TU35186 other downstream 806174 9295068 ~ 9296746 (-) True G26298
TU35108 other downstream 1123844 8852787 ~ 8979076 (-) False LOC120555589
TU34939 other downstream 1956019 8144207 ~ 8146901 (-) True G26071
XR_005638761.1 other downstream 2758164 7332784 ~ 7344756 (-) False lmnl3
TU34701 other downstream 3458314 6642446 ~ 6644606 (-) False dok4
XR_005638773.1 other upstream 1373599 11476764 ~ 11510299 (-) True mtfmt
XR_005638741.1 other upstream 1540066 11643231 ~ 11669155 (-) True LOC120555651
TU35842 other upstream 1540406 11643571 ~ 11669269 (-) False LOC120555651
TU35894 other upstream 1857536 11960701 ~ 11961772 (-) True G26891
TU35932 other upstream 2201374 12304539 ~ 12304824 (-) True G26924

Expression Profile