RNA id: TU35391



Basic Information


Item Value
RNA id TU35391
length 361
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G26467
representative True

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 10126830 ~ 10127190 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CACTgccgctcaatcagctgttgatgaaatgtcataaagtcgttattatacacggctctgcagagcagtctgctctactgaactctgGCGAACGGTCAGCcgcgctctctctcccctctgaggctgaaaaactggaacatgaaatccgcactcacgcAGGTCTGTGAAATATGAccgctacagtttattggaaaatagcgttggtcaccctgactttgatgaatttactgtttatcagaccccagatgagacaagaagcgttaacgttagcaaacgctgtggtccctctgcctctgacacCCCGCTGGCCACTGTAGGAGatgctgtgttaaaaacaaaacaaaaattaataaaaagagac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU35385 lncRNA downstream 4221 10122398 ~ 10122609 (-) True G26461
TU35379 lncRNA downstream 23665 10102920 ~ 10103165 (-) True G26455
TU35378 lncRNA downstream 25263 10100237 ~ 10101567 (-) True G26454
TU35307 lncRNA downstream 348108 9778274 ~ 9778722 (-) True G26390
TU35302 lncRNA downstream 389784 9736811 ~ 9737046 (-) True G26385
TU35443 lncRNA upstream 188378 10315568 ~ 10316079 (-) True G26506
TU35444 lncRNA upstream 189558 10316748 ~ 10317126 (-) True G26507
TU35448 lncRNA upstream 237630 10364820 ~ 10365176 (-) True G26510
TU35454 lncRNA upstream 259738 10386928 ~ 10387201 (-) True G26515
TU35461 lncRNA upstream 263786 10390976 ~ 10395296 (-) True LOC120556222
XM_039795797.1 mRNA downstream 801542 9308597 ~ 9325288 (-) True fah
XM_039794771.1 mRNA downstream 897253 9155261 ~ 9229577 (-) False arnt2
XM_039794769.1 mRNA downstream 897257 9153242 ~ 9229573 (-) True arnt2
XM_039794379.1 mRNA downstream 1186272 8759601 ~ 8940558 (-) True LOC120555589
XM_039795210.1 mRNA upstream 788 10127978 ~ 10231722 (-) True chsy1
XM_039795882.1 mRNA upstream 106274 10233464 ~ 10241227 (-) True selenos
XM_039796025.1 mRNA upstream 116934 10244124 ~ 10245386 (-) True zgc:113274
XM_039795220.1 mRNA upstream 132041 10259231 ~ 10292924 (-) True snrpa1
XM_039795490.1 mRNA upstream 513748 10640938 ~ 10731901 (-) False ano9b
TU35186 other downstream 830084 9295068 ~ 9296746 (-) True G26298
TU35108 other downstream 1147754 8852787 ~ 8979076 (-) False LOC120555589
TU34939 other downstream 1979929 8144207 ~ 8146901 (-) True G26071
XR_005638761.1 other downstream 2782074 7332784 ~ 7344756 (-) False lmnl3
TU34701 other downstream 3482224 6642446 ~ 6644606 (-) False dok4
XR_005638773.1 other upstream 1349574 11476764 ~ 11510299 (-) True mtfmt
XR_005638741.1 other upstream 1516041 11643231 ~ 11669155 (-) True LOC120555651
TU35842 other upstream 1516381 11643571 ~ 11669269 (-) False LOC120555651
TU35894 other upstream 1833511 11960701 ~ 11961772 (-) True G26891
TU35932 other upstream 2177349 12304539 ~ 12304824 (-) True G26924

Expression Profile