RNA id: TU35454



Basic Information


Item Value
RNA id TU35454
length 231
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G26515
representative True

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 10386928 ~ 10387201 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


agaggacagaaagaggaaagaagaaagaggaaagaagaacgAGGAAAGAAGGaataaagaggacagaaagagggaagaagaaagaggacagaaggaagaaagaggacagaaagaggcaagaagaaagaggacagaaagaggaaagaagaaagaggaaagagaacagaggatagaaagaggaaagaggacagaaagaggaaagagaacagagagcgagaggacagaaagagg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU35448 lncRNA downstream 21752 10364820 ~ 10365176 (-) True G26510
TU35444 lncRNA downstream 69802 10316748 ~ 10317126 (-) True G26507
TU35443 lncRNA downstream 70849 10315568 ~ 10316079 (-) True G26506
TU35391 lncRNA downstream 259738 10126830 ~ 10127190 (-) True G26467
TU35385 lncRNA downstream 264319 10122398 ~ 10122609 (-) True G26461
TU35461 lncRNA upstream 3775 10390976 ~ 10395296 (-) True LOC120556222
XR_005638828.1 lncRNA upstream 7718 10394919 ~ 10402234 (-) False LOC120556222
TU35465 lncRNA upstream 31269 10418470 ~ 10418816 (-) True G26525
TU35495 lncRNA upstream 232229 10619430 ~ 10619641 (-) True G26550
TU35496 lncRNA upstream 232460 10619661 ~ 10619861 (-) True G26551
XM_039795220.1 mRNA downstream 94004 10259231 ~ 10292924 (-) True snrpa1
XM_039796025.1 mRNA downstream 141542 10244124 ~ 10245386 (-) True zgc:113274
XM_039795882.1 mRNA downstream 145701 10233464 ~ 10241227 (-) True selenos
XM_039795210.1 mRNA downstream 155206 10127978 ~ 10231722 (-) True chsy1
XM_039795797.1 mRNA downstream 1061640 9308597 ~ 9325288 (-) True fah
XM_039795490.1 mRNA upstream 253737 10640938 ~ 10731901 (-) False ano9b
XM_039795489.1 mRNA upstream 253737 10640938 ~ 10731901 (-) True ano9b
XM_039794260.1 mRNA upstream 358660 10745861 ~ 10750166 (-) True LOC120555515
XM_039795096.1 mRNA upstream 378972 10766173 ~ 10789770 (-) True tssc4
XM_039795097.1 mRNA upstream 378976 10766177 ~ 10789768 (-) False tssc4
TU35186 other downstream 1090182 9295068 ~ 9296746 (-) True G26298
TU35108 other downstream 1407852 8852787 ~ 8979076 (-) False LOC120555589
TU34939 other downstream 2240027 8144207 ~ 8146901 (-) True G26071
XR_005638761.1 other downstream 3042172 7332784 ~ 7344756 (-) False lmnl3
TU34701 other downstream 3742322 6642446 ~ 6644606 (-) False dok4
XR_005638773.1 other upstream 1089563 11476764 ~ 11510299 (-) True mtfmt
XR_005638741.1 other upstream 1256030 11643231 ~ 11669155 (-) True LOC120555651
TU35842 other upstream 1256370 11643571 ~ 11669269 (-) False LOC120555651
TU35894 other upstream 1573500 11960701 ~ 11961772 (-) True G26891
TU35932 other upstream 1917338 12304539 ~ 12304824 (-) True G26924

Expression Profile