RNA id: TU35695


Basic Information

Item Value
RNA id TU35695
length 306
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G26724
representative True

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 11224420 ~ 11224725 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

attatttattattgagctaatttcaaacacttttttatcatccaataaggtacttcaagctttacaataagaagtcaaggaagtgaaggactacagccacatcccagcccttcagagaactgtcctgcagaaaaggctgtcgtccagactggagcggtgggccatcagtgagctcaggagaccagatgatcccaggcgtccaggagttgtgtgatattcctgcaccaccctcagaagtgttgttgcagacacaagtcagcagagaaatacagcttgccttaggtgaaactgaatatgtgaaatata

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast
ko04114 Oocyte meiosis

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU35693 lncRNA upstream 15119 11208721 ~ 11209301 (+) True G26722
TU35685 lncRNA upstream 36836 11187111 ~ 11187584 (+) True G26714
TU35684 lncRNA upstream 44302 11179611 ~ 11180118 (+) True G26713
TU35683 lncRNA upstream 45167 11177673 ~ 11179253 (+) True G26712
TU35682 lncRNA upstream 47132 11176874 ~ 11177288 (+) True G26711
XR_005638791.1 lncRNA downstream 78868 11303593 ~ 11325210 (+) True LOC120556080
TU35720 lncRNA downstream 88299 11313024 ~ 11316099 (+) True G26744
TU35721 lncRNA downstream 93210 11317935 ~ 11318254 (+) True G26745
TU35722 lncRNA downstream 101218 11325943 ~ 11329657 (+) True G26746
TU35724 lncRNA downstream 110710 11335435 ~ 11335807 (+) True G26748
XM_039794949.1 mRNA upstream 86022 10934633 ~ 11138398 (+) True minar1
XM_039794950.1 mRNA upstream 86022 10934633 ~ 11138398 (+) False minar1
XM_039794951.1 mRNA upstream 86731 10934633 ~ 11137689 (+) False minar1
XM_039794955.1 mRNA upstream 92948 11129921 ~ 11131472 (+) True LOC120555826
XM_039794952.1 mRNA upstream 103305 10934633 ~ 11121115 (+) False minar1
XM_039795938.1 mRNA downstream 678547 11903272 ~ 11912722 (+) True lto1
XM_039794273.1 mRNA downstream 1331322 12556047 ~ 12562553 (+) True LOC120555527
XM_039795800.1 mRNA downstream 1841227 13065952 ~ 13071332 (+) True LOC120556313
XM_039796119.1 mRNA downstream 1864810 13089535 ~ 13091435 (+) True LOC120556474
XM_039795868.1 mRNA downstream 1919782 13144507 ~ 13176403 (+) True si:cabz01068815.1
TU35313 other upstream 1364420 9847277 ~ 9860000 (+) True aldh1a3
TU35242 other upstream 1619984 9566831 ~ 9604436 (+) False adamts17
TU35121 other upstream 2069077 9068729 ~ 9155343 (+) True G26236
TU35083 other upstream 2464119 8753701 ~ 8760301 (+) True G26205
TU34541 other upstream 4934644 6289056 ~ 6289776 (+) False LOC120555541
XR_005638880.1 other downstream 806896 12031621 ~ 12031728 (+) True LOC120556595
TU36106 other downstream 1885032 13109757 ~ 13110339 (+) True G27086
TU36145 other downstream 2010510 13235235 ~ 13237819 (+) True LOC120556202
TU36647 other downstream 4216752 15441477 ~ 15446392 (+) False LOC120556433
TU36678 other downstream 4250439 15475164 ~ 15486421 (+) False LOC120556001

Expression Profile