RNA id: TU35770



Basic Information


Item Value
RNA id TU35770
length 448
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G26785
representative True

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 11470780 ~ 11471227 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ggagggctttataggtgaggaccaggattttgtaggtgatccggtgggaaatgggaagccagtggagttgttttaggactggagtgatgtggtgccaggatttggagcaggtaatgaggcgggcggctgagttctggaccagttggagtcggttgatgttggtagagctgatgccgaggagaagtgagttgcagtagtccagtcgggaggagatgaaggcgtgaatgagtctttcagcagcggggggtgtgagagagggtctgattttggcgatgttgcggaggtgaaagaaggaggttttaatgacttgacggatgtgaggctcaagggagagggtggaatcaaagataacgccaaggttgcgggcctggggagatggggagacaatggtgccgtcgatggtgagagtggggttattggttttgctgagtgtggatttggagccgat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU35726 lncRNA downstream 124909 11345628 ~ 11345871 (-) True G26750
TU35713 lncRNA downstream 244368 11225218 ~ 11226412 (-) True G26737
XR_005638732.1 lncRNA downstream 286956 11183133 ~ 11183824 (-) True LOC120555566
XR_005638813.1 lncRNA downstream 303476 11165880 ~ 11167304 (-) True LOC120556158
TU35664 lncRNA downstream 331455 11138734 ~ 11139325 (-) True G26693
TU35796 lncRNA upstream 88341 11559568 ~ 11559895 (-) True G26802
TU35798 lncRNA upstream 92995 11564222 ~ 11564551 (-) True G26804
TU35799 lncRNA upstream 93457 11564684 ~ 11565380 (-) True G26805
TU35800 lncRNA upstream 95035 11566262 ~ 11566625 (-) True G26806
TU35829 lncRNA upstream 100586 11571813 ~ 11572177 (-) True G26831
XM_039794604.1 mRNA downstream 7420 11387677 ~ 11463360 (-) False celf1
XM_039794616.1 mRNA downstream 7420 11391038 ~ 11463360 (-) False celf1
XM_039794610.1 mRNA downstream 7420 11391038 ~ 11463360 (-) False celf1
XM_039794609.1 mRNA downstream 7420 11391038 ~ 11463360 (-) False celf1
XM_039794606.1 mRNA downstream 7420 11391038 ~ 11463360 (-) False celf1
XM_039795128.1 mRNA upstream 5279 11476506 ~ 11510300 (-) False mtfmt
XM_039795126.1 mRNA upstream 5279 11476506 ~ 11510299 (-) False mtfmt
XM_039795127.1 mRNA upstream 5519 11476746 ~ 11510299 (-) False mtfmt
XM_039795833.1 mRNA upstream 102806 11574033 ~ 11599614 (-) True c3h16orf87
XM_039795832.1 mRNA upstream 107497 11578724 ~ 11599622 (-) False c3h16orf87
TU35186 other downstream 2174034 9295068 ~ 9296746 (-) True G26298
TU35108 other downstream 2491704 8852787 ~ 8979076 (-) False LOC120555589
TU34939 other downstream 3323879 8144207 ~ 8146901 (-) True G26071
XR_005638761.1 other downstream 4126024 7332784 ~ 7344756 (-) False lmnl3
TU34701 other downstream 4826174 6642446 ~ 6644606 (-) False dok4
XR_005638773.1 other upstream 5537 11476764 ~ 11510299 (-) True mtfmt
XR_005638741.1 other upstream 172004 11643231 ~ 11669155 (-) True LOC120555651
TU35842 other upstream 172344 11643571 ~ 11669269 (-) False LOC120555651
TU35894 other upstream 489474 11960701 ~ 11961772 (-) True G26891
TU35932 other upstream 833312 12304539 ~ 12304824 (-) True G26924

Expression Profile