RNA id: TU35796



Basic Information


Item Value
RNA id TU35796
length 328
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G26802
representative True

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 11559568 ~ 11559895 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


cggagagtctgagcaggatggatcagagactgattacacacttaatttcagtgagagatgtgaggagaggaagagcaagggaaaaggagagatctggccgcgaggggggggcccatctaagatctcgtcccgggcccaggcaagactgtcagctggcctgctctcagaaacttgtcttctgattctgttgtggctttgggtctgccagacctcttcctgtcagagtttcccccagtttctaagtgccttttgatggtgaagaatgcTGTattcactgacaccttgactttctttgcaatttctctgtaggaaagaccaacattcttaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU35770 lncRNA downstream 88341 11470780 ~ 11471227 (-) True G26785
TU35726 lncRNA downstream 213697 11345628 ~ 11345871 (-) True G26750
TU35713 lncRNA downstream 333156 11225218 ~ 11226412 (-) True G26737
XR_005638732.1 lncRNA downstream 375744 11183133 ~ 11183824 (-) True LOC120555566
XR_005638813.1 lncRNA downstream 392264 11165880 ~ 11167304 (-) True LOC120556158
TU35798 lncRNA upstream 4327 11564222 ~ 11564551 (-) True G26804
TU35799 lncRNA upstream 4789 11564684 ~ 11565380 (-) True G26805
TU35800 lncRNA upstream 6367 11566262 ~ 11566625 (-) True G26806
TU35829 lncRNA upstream 11918 11571813 ~ 11572177 (-) True G26831
TU35858 lncRNA upstream 156510 11716405 ~ 11716708 (-) True G26857
XM_039795128.1 mRNA downstream 49268 11476506 ~ 11510300 (-) False mtfmt
XM_039795126.1 mRNA downstream 49269 11476506 ~ 11510299 (-) False mtfmt
XM_039795127.1 mRNA downstream 49269 11476746 ~ 11510299 (-) False mtfmt
XM_039794619.1 mRNA downstream 96208 11391038 ~ 11463360 (-) False celf1
XM_039795833.1 mRNA upstream 14138 11574033 ~ 11599614 (-) True c3h16orf87
XM_039795832.1 mRNA upstream 18829 11578724 ~ 11599622 (-) False c3h16orf87
XM_039794533.1 mRNA upstream 47145 11607040 ~ 11636133 (-) True vps35
XM_039794534.1 mRNA upstream 83336 11643231 ~ 11649706 (-) False LOC120555651
XM_039793926.1 mRNA upstream 173546 11733441 ~ 11740920 (-) True fgf19
XR_005638773.1 other downstream 49269 11476764 ~ 11510299 (-) True mtfmt
TU35186 other downstream 2262822 9295068 ~ 9296746 (-) True G26298
TU35108 other downstream 2580492 8852787 ~ 8979076 (-) False LOC120555589
TU34939 other downstream 3412667 8144207 ~ 8146901 (-) True G26071
XR_005638761.1 other downstream 4214812 7332784 ~ 7344756 (-) False lmnl3
XR_005638741.1 other upstream 83336 11643231 ~ 11669155 (-) True LOC120555651
TU35842 other upstream 83676 11643571 ~ 11669269 (-) False LOC120555651
TU35894 other upstream 400806 11960701 ~ 11961772 (-) True G26891
TU35932 other upstream 744644 12304539 ~ 12304824 (-) True G26924
TU36095 other upstream 1510101 13069996 ~ 13095766 (-) True G27075

Expression Profile