RNA id: TU35894



Basic Information


Item Value
RNA id TU35894
length 1072
RNA type TUCP
GC content 0.41
exon number 1
gene id G26891
representative True

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 11960701 ~ 11961772 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AACGGCATCCGGCTCTCCTCAACCCCtttcatcattgtcatcatcgCCACCTCTATCGTCGGAACACTTCCTGCCGCCCCCACCTACACCTCCTCTGCCACCATCTCTATTGTTTGGGGCACTTCCCCCTCAGACATGTGCATATCAAGCTATACCCTCAACAACTGCTGTATTACAACAGGGAGGTGTTGCTGATTGTTCGGACACAGAGGCGCCTGATCAGACTGATGGTGTGGTGTCATCTTTGTTTATAGATAGCGTTAAAACAGCTTCTCTACATCTTCTTAACATAGTTCTTTACAAGTATTTGGAAGAGCTTTGTTCGGGGTGTCAGATCAATCATCCAAGCCAGAAACAGCATGCCTGTTTACAggggctaccagaacacttctacactgtccactttgaacAGCTTATGAAAAGACTACTGACTGATAAATTCATTGGTGTCGTGCAACGTTTTCTGTCCTTGAAACATCTCACGGCTGATGAGGGTAGAATCAGGGGAGTATCTGAAACAGTTTTGTACGAGTTGAAAACGTCTGAAGATGTTACGACTAAAATCAGTGCTATGTATGACTCTATGATAGGGAATGATCTTGTCAAAATAGCCGAAATTAGAGAGATTGGTGACTATTGGAGAGATTTATATGCTAGAAAAAACTAACAGGGTGAAAATATGGGGAATtgtttatgtgtaatgtataacCATATCAGTGAGCGATACCACGTATCGCATTTATCTGGTATTTTAGATCAAGCCATTGCTAATAATGTGAAcgatgttgaaaaataccaatgtaAGAGTGTCGATGTAGATCGTACAGTTGTGAGTAGGTTAGAAAAACTGATGGTGATTGTAAGAAGACAACATAGCACCCCTCCTTGGGAGGATCTGTTGCAgatgttattatcaatgttaaTGACACGTGAGAGCAtagtggaaacattttgtgatgtcaTAGCCAACATTACACGTAATTTTAAGATGCTGAAAGTTTATCACCTGCTTACTATGTATACAATGCTTGTAGACACCGTGAGTTTGTATGTGCAAGAAAAACAGTATACC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU35866 lncRNA downstream 189832 11770373 ~ 11770869 (-) True G26864
TU35858 lncRNA downstream 243993 11716405 ~ 11716708 (-) True G26857
TU35829 lncRNA downstream 388524 11571813 ~ 11572177 (-) True G26831
TU35800 lncRNA downstream 394076 11566262 ~ 11566625 (-) True G26806
TU35799 lncRNA downstream 395321 11564684 ~ 11565380 (-) True G26805
TU35919 lncRNA upstream 243303 12205075 ~ 12205324 (-) True G26912
XR_005638810.1 lncRNA upstream 305371 12267143 ~ 12267920 (-) True LOC120556136
TU35929 lncRNA upstream 317377 12279149 ~ 12279413 (-) True G26921
TU35931 lncRNA upstream 321610 12283382 ~ 12283632 (-) True G26923
TU35933 lncRNA upstream 344887 12306659 ~ 12306880 (-) True G26925
XM_039795544.1 mRNA downstream 163482 11794280 ~ 11797219 (-) True fgf3
XM_039795496.1 mRNA downstream 176264 11780768 ~ 11784437 (-) True fgf4
XM_039793926.1 mRNA downstream 219781 11733441 ~ 11740920 (-) True fgf19
XM_039794534.1 mRNA downstream 310995 11643231 ~ 11649706 (-) False LOC120555651
XM_039794533.1 mRNA downstream 324568 11607040 ~ 11636133 (-) True vps35
XM_039795659.1 mRNA upstream 18406 11980178 ~ 11986927 (-) True ccnd1
XM_039795187.1 mRNA upstream 195972 12157744 ~ 12178671 (-) True LOC120555959
XM_039795896.1 mRNA upstream 527448 12489220 ~ 12493171 (-) True vstm2b
XM_039796072.1 mRNA upstream 1226642 13188414 ~ 13198636 (-) True rasl12
XM_039795644.1 mRNA upstream 1246557 13208329 ~ 13238252 (-) True ubap1lb
TU35842 other downstream 291432 11643571 ~ 11669269 (-) False LOC120555651
XR_005638741.1 other downstream 291546 11643231 ~ 11669155 (-) True LOC120555651
XR_005638773.1 other downstream 450402 11476764 ~ 11510299 (-) True mtfmt
TU35186 other downstream 2663955 9295068 ~ 9296746 (-) True G26298
TU35108 other downstream 2981625 8852787 ~ 8979076 (-) False LOC120555589
TU35932 other upstream 342767 12304539 ~ 12304824 (-) True G26924
TU36095 other upstream 1108224 13069996 ~ 13095766 (-) True G27075
XR_005638877.1 other upstream 1327438 13289210 ~ 13289264 (-) True LOC120556590
TU36388 other upstream 2507986 14469758 ~ 14470345 (-) True G27321
TU36517 other upstream 2880941 14842713 ~ 14843905 (-) True G27420

Expression Profile