RNA id: TU35909



Basic Information


Item Value
RNA id TU35909
length 281
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G26903
representative True

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 12114842 ~ 12115122 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tgactacgtttacatgcagccaataacccgttcaaaaccggaatattagcaataacccggtcgcgcacggccatgtaaacaccggcaaaaacccgaatatgctcatattccggtttttaaaaacccgaatatgctacctgggttaccccttttctaacccgacattttggtcatgtaaacgcgtatcggcatatccccatcaaaaggaacattgatttgtgttctgcgcatgttctattcgcaaggaatcttggtcttttgagtagaggaacttcttgtat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU35896 lncRNA upstream 150983 11963571 ~ 11963859 (+) True G26893
TU35893 lncRNA upstream 153109 11960691 ~ 11961733 (+) True G26890
XR_005638841.1 lncRNA upstream 175039 11939074 ~ 11939803 (+) True LOC120556354
TU35883 lncRNA upstream 202127 11903371 ~ 11912715 (+) False lto1
TU35880 lncRNA upstream 302900 11811683 ~ 11811942 (+) True G26878
TU35918 lncRNA downstream 89626 12204748 ~ 12205002 (+) True G26911
TU35920 lncRNA downstream 95468 12210590 ~ 12210862 (+) True G26913
TU35922 lncRNA downstream 120394 12235516 ~ 12235757 (+) True G26915
TU35930 lncRNA downstream 168260 12283382 ~ 12283632 (+) True G26922
TU35948 lncRNA downstream 265207 12380329 ~ 12380652 (+) True G26939
XM_039795938.1 mRNA upstream 202120 11903272 ~ 11912722 (+) True lto1
XM_039794951.1 mRNA upstream 977153 10934633 ~ 11137689 (+) False minar1
XM_039794273.1 mRNA downstream 440925 12556047 ~ 12562553 (+) True LOC120555527
XM_039795800.1 mRNA downstream 950830 13065952 ~ 13071332 (+) True LOC120556313
XM_039796119.1 mRNA downstream 974413 13089535 ~ 13091435 (+) True LOC120556474
XM_039795868.1 mRNA downstream 1029385 13144507 ~ 13176403 (+) True si:cabz01068815.1
XM_039795869.1 mRNA downstream 1046008 13161130 ~ 13176403 (+) False si:cabz01068815.1
XR_005638880.1 other upstream 83114 12031621 ~ 12031728 (+) True LOC120556595
TU35313 other upstream 2254842 9847277 ~ 9860000 (+) True aldh1a3
TU35242 other upstream 2510406 9566831 ~ 9604436 (+) False adamts17
TU35121 other upstream 2959499 9068729 ~ 9155343 (+) True G26236
TU35083 other upstream 3354541 8753701 ~ 8760301 (+) True G26205
TU36106 other downstream 994635 13109757 ~ 13110339 (+) True G27086
TU36145 other downstream 1120113 13235235 ~ 13237819 (+) True LOC120556202
TU36647 other downstream 3326355 15441477 ~ 15446392 (+) False LOC120556433
TU36678 other downstream 3360042 15475164 ~ 15486421 (+) False LOC120556001
XR_005638756.1 other downstream 5609426 17724548 ~ 17742734 (+) True LOC120555788

Expression Profile