RNA id: TU35918



Basic Information


Item Value
RNA id TU35918
length 255
lncRNA type inter_gene
GC content 0.55
exon number 1
gene id G26911
representative True

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 12204748 ~ 12205002 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AAAAGACATTGCTGCCACGTCCGTTCAACTGGAACCAAGTCTACACGAAGGACGCAAAGGGTTCATACAGGTTCTACCATGACCGCAGGCATTCGGCACGCACGCTCCCTGAACTTCACCCTGGTCAGGCTGTTAGAGTGAAGCTCGATGGGGAGAGGGGTTGGACGACACCTGCCAGGGTCATCAGTAAGTCTAAGGAGCCGAGATCCTACCTCGTGGAGATGGACAATGGGAACGTCACCCGTTGGAACAGGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU35909 lncRNA upstream 89626 12114842 ~ 12115122 (+) True G26903
TU35896 lncRNA upstream 240889 11963571 ~ 11963859 (+) True G26893
TU35893 lncRNA upstream 243015 11960691 ~ 11961733 (+) True G26890
XR_005638841.1 lncRNA upstream 264945 11939074 ~ 11939803 (+) True LOC120556354
TU35883 lncRNA upstream 292033 11903371 ~ 11912715 (+) False lto1
TU35920 lncRNA downstream 5588 12210590 ~ 12210862 (+) True G26913
TU35922 lncRNA downstream 30514 12235516 ~ 12235757 (+) True G26915
TU35930 lncRNA downstream 78380 12283382 ~ 12283632 (+) True G26922
TU35948 lncRNA downstream 175327 12380329 ~ 12380652 (+) True G26939
XR_005638839.1 lncRNA downstream 290643 12495645 ~ 12496162 (+) True LOC120556331
XM_039795938.1 mRNA upstream 292026 11903272 ~ 11912722 (+) True lto1
XM_039794951.1 mRNA upstream 1067059 10934633 ~ 11137689 (+) False minar1
XM_039794273.1 mRNA downstream 351045 12556047 ~ 12562553 (+) True LOC120555527
XM_039795800.1 mRNA downstream 860950 13065952 ~ 13071332 (+) True LOC120556313
XM_039796119.1 mRNA downstream 884533 13089535 ~ 13091435 (+) True LOC120556474
XM_039795868.1 mRNA downstream 939505 13144507 ~ 13176403 (+) True si:cabz01068815.1
XM_039795869.1 mRNA downstream 956128 13161130 ~ 13176403 (+) False si:cabz01068815.1
XR_005638880.1 other upstream 173020 12031621 ~ 12031728 (+) True LOC120556595
TU35313 other upstream 2344748 9847277 ~ 9860000 (+) True aldh1a3
TU35242 other upstream 2600312 9566831 ~ 9604436 (+) False adamts17
TU35121 other upstream 3049405 9068729 ~ 9155343 (+) True G26236
TU35083 other upstream 3444447 8753701 ~ 8760301 (+) True G26205
TU36106 other downstream 904755 13109757 ~ 13110339 (+) True G27086
TU36145 other downstream 1030233 13235235 ~ 13237819 (+) True LOC120556202
TU36647 other downstream 3236475 15441477 ~ 15446392 (+) False LOC120556433
TU36678 other downstream 3270162 15475164 ~ 15486421 (+) False LOC120556001
XR_005638756.1 other downstream 5519546 17724548 ~ 17742734 (+) True LOC120555788

Expression Profile