RNA id: TU35919



Basic Information


Item Value
RNA id TU35919
length 250
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G26912
representative True

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 12205075 ~ 12205324 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GGCAAATAATCTCCGAATGGTGCAGGACGTCACAGGGGTAGACTGCCCTCAGTCCTGAAAGGGGTTATTCTGCCCTTTTGAACATCTCAGTCTAGTAACCTAAGAAGCACCGTTATCTCACGACCCCTGGAAGTCCTTTTCACAGGAGTGGATGGTGGAAGGGGAGACCCTGGGGAAGGGCCTGCTGGTAGCTGGCTCACTAGTGATTCCGGCGGCGCAGCCACATCTGTCAGCGGGGAACCGCTGTCCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU35866 lncRNA downstream 434206 11770373 ~ 11770869 (-) True G26864
TU35858 lncRNA downstream 488367 11716405 ~ 11716708 (-) True G26857
TU35829 lncRNA downstream 632898 11571813 ~ 11572177 (-) True G26831
TU35800 lncRNA downstream 638450 11566262 ~ 11566625 (-) True G26806
TU35799 lncRNA downstream 639695 11564684 ~ 11565380 (-) True G26805
XR_005638810.1 lncRNA upstream 61819 12267143 ~ 12267920 (-) True LOC120556136
TU35929 lncRNA upstream 73825 12279149 ~ 12279413 (-) True G26921
TU35931 lncRNA upstream 78058 12283382 ~ 12283632 (-) True G26923
TU35933 lncRNA upstream 101335 12306659 ~ 12306880 (-) True G26925
XR_005638721.1 lncRNA upstream 151362 12356686 ~ 12358631 (-) True LOC120555517
XM_039795187.1 mRNA downstream 26404 12157744 ~ 12178671 (-) True LOC120555959
XM_039795659.1 mRNA downstream 218148 11980178 ~ 11986927 (-) True ccnd1
XM_039795544.1 mRNA downstream 407856 11794280 ~ 11797219 (-) True fgf3
XM_039795496.1 mRNA downstream 420638 11780768 ~ 11784437 (-) True fgf4
XM_039793926.1 mRNA downstream 464155 11733441 ~ 11740920 (-) True fgf19
XM_039795896.1 mRNA upstream 283896 12489220 ~ 12493171 (-) True vstm2b
XM_039796072.1 mRNA upstream 983090 13188414 ~ 13198636 (-) True rasl12
XM_039795644.1 mRNA upstream 1003005 13208329 ~ 13238252 (-) True ubap1lb
XM_039795200.1 mRNA upstream 1035362 13240686 ~ 13248416 (-) True pdcd7
XM_039794264.1 mRNA upstream 1079917 13285241 ~ 13294261 (-) True LOC120555522
TU35894 other downstream 243303 11960701 ~ 11961772 (-) True G26891
TU35842 other downstream 535806 11643571 ~ 11669269 (-) False LOC120555651
XR_005638741.1 other downstream 535920 11643231 ~ 11669155 (-) True LOC120555651
XR_005638773.1 other downstream 694776 11476764 ~ 11510299 (-) True mtfmt
TU35186 other downstream 2908329 9295068 ~ 9296746 (-) True G26298
TU35932 other upstream 99215 12304539 ~ 12304824 (-) True G26924
TU36095 other upstream 864672 13069996 ~ 13095766 (-) True G27075
XR_005638877.1 other upstream 1083886 13289210 ~ 13289264 (-) True LOC120556590
TU36388 other upstream 2264434 14469758 ~ 14470345 (-) True G27321
TU36517 other upstream 2637389 14842713 ~ 14843905 (-) True G27420

Expression Profile