RNA id: TU35931



Basic Information


Item Value
RNA id TU35931
length 251
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G26923
representative True

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 12283382 ~ 12283632 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ggcccaatcccaaagtccggactcacagactcacggactttagtgcgcgttctcgcgaaattcgtaagggcttagggttgtcccaatgtggaatttcaaagggcgtgagggtttgagtacacacttaccgagccctttccgtgagtctgcatcgatgcagacttcaccaaagggaattacccacagttcaaagcgttgtgacgttcACCGCGGAGACCatagggaaatccggaaattacgaaggtaaacaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU35929 lncRNA downstream 3969 12279149 ~ 12279413 (-) True G26921
XR_005638810.1 lncRNA downstream 15462 12267143 ~ 12267920 (-) True LOC120556136
TU35919 lncRNA downstream 78058 12205075 ~ 12205324 (-) True G26912
TU35866 lncRNA downstream 512513 11770373 ~ 11770869 (-) True G26864
TU35858 lncRNA downstream 566674 11716405 ~ 11716708 (-) True G26857
TU35933 lncRNA upstream 23027 12306659 ~ 12306880 (-) True G26925
XR_005638721.1 lncRNA upstream 73054 12356686 ~ 12358631 (-) True LOC120555517
TU35988 lncRNA upstream 280639 12564271 ~ 12564883 (-) True G26974
TU36000 lncRNA upstream 321990 12605622 ~ 12606134 (-) True G26982
TU36001 lncRNA upstream 326465 12610097 ~ 12610432 (-) True G26983
XM_039795187.1 mRNA downstream 104711 12157744 ~ 12178671 (-) True LOC120555959
XM_039795659.1 mRNA downstream 296455 11980178 ~ 11986927 (-) True ccnd1
XM_039795544.1 mRNA downstream 486163 11794280 ~ 11797219 (-) True fgf3
XM_039795496.1 mRNA downstream 498945 11780768 ~ 11784437 (-) True fgf4
XM_039793926.1 mRNA downstream 542462 11733441 ~ 11740920 (-) True fgf19
XM_039795896.1 mRNA upstream 205588 12489220 ~ 12493171 (-) True vstm2b
XM_039796072.1 mRNA upstream 904782 13188414 ~ 13198636 (-) True rasl12
XM_039795644.1 mRNA upstream 924697 13208329 ~ 13238252 (-) True ubap1lb
XM_039795200.1 mRNA upstream 957054 13240686 ~ 13248416 (-) True pdcd7
XM_039794264.1 mRNA upstream 1001609 13285241 ~ 13294261 (-) True LOC120555522
TU35894 other downstream 321610 11960701 ~ 11961772 (-) True G26891
TU35842 other downstream 614113 11643571 ~ 11669269 (-) False LOC120555651
XR_005638741.1 other downstream 614227 11643231 ~ 11669155 (-) True LOC120555651
XR_005638773.1 other downstream 773083 11476764 ~ 11510299 (-) True mtfmt
TU35186 other downstream 2986636 9295068 ~ 9296746 (-) True G26298
TU35932 other upstream 20907 12304539 ~ 12304824 (-) True G26924
TU36095 other upstream 786364 13069996 ~ 13095766 (-) True G27075
XR_005638877.1 other upstream 1005578 13289210 ~ 13289264 (-) True LOC120556590
TU36388 other upstream 2186126 14469758 ~ 14470345 (-) True G27321
TU36517 other upstream 2559081 14842713 ~ 14843905 (-) True G27420

Expression Profile