RNA id: TU36022



Basic Information


Item Value
RNA id TU36022
length 261
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G27004
representative True

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 12694662 ~ 12694922 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ttttaatgtttttaatttgtttattaatgttttaaaattgtttttaattgttttctaactgctctttaatgttttatgtaaagcactttgaattgccctgttgctgaaatgcgctatacaaataaagctgccttgccttgccttgccttaccagCACACGTTGTAATGTGCTGGTAATGACTGTACTGGTaatgacatttttgtcaaaaaattAGCCTTATTAGCAAAGATGATGACTAAGCAAATGTAGCTAGCTTTCTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36019 lncRNA downstream 18433 12675980 ~ 12676229 (-) True G27001
XR_005638837.1 lncRNA downstream 21973 12670521 ~ 12672689 (-) True LOC120556302
TU36001 lncRNA downstream 84230 12610097 ~ 12610432 (-) True G26983
TU36000 lncRNA downstream 88528 12605622 ~ 12606134 (-) True G26982
TU35988 lncRNA downstream 129779 12564271 ~ 12564883 (-) True G26974
TU36029 lncRNA upstream 71719 12766641 ~ 12766842 (-) True G27011
TU36042 lncRNA upstream 175709 12870631 ~ 12870928 (-) True G27024
TU36044 lncRNA upstream 190930 12885852 ~ 12891293 (-) True G27026
XR_005638832.1 lncRNA upstream 289387 12984309 ~ 12986418 (-) True LOC120556265
TU36081 lncRNA upstream 328277 13023199 ~ 13023625 (-) True G27062
XM_039795896.1 mRNA downstream 201491 12489220 ~ 12493171 (-) True vstm2b
XM_039795187.1 mRNA downstream 515991 12157744 ~ 12178671 (-) True LOC120555959
XM_039795659.1 mRNA downstream 707735 11980178 ~ 11986927 (-) True ccnd1
XM_039795544.1 mRNA downstream 897443 11794280 ~ 11797219 (-) True fgf3
XM_039795496.1 mRNA downstream 910225 11780768 ~ 11784437 (-) True fgf4
XM_039796072.1 mRNA upstream 493492 13188414 ~ 13198636 (-) True rasl12
XM_039795644.1 mRNA upstream 513407 13208329 ~ 13238252 (-) True ubap1lb
XM_039795200.1 mRNA upstream 545764 13240686 ~ 13248416 (-) True pdcd7
XM_039794264.1 mRNA upstream 590319 13285241 ~ 13294261 (-) True LOC120555522
XM_039796044.1 mRNA upstream 707402 13402324 ~ 13406615 (-) True chst1
TU35932 other downstream 389838 12304539 ~ 12304824 (-) True G26924
TU35894 other downstream 732890 11960701 ~ 11961772 (-) True G26891
TU35842 other downstream 1025393 11643571 ~ 11669269 (-) False LOC120555651
XR_005638741.1 other downstream 1025507 11643231 ~ 11669155 (-) True LOC120555651
XR_005638773.1 other downstream 1184363 11476764 ~ 11510299 (-) True mtfmt
TU36095 other upstream 375074 13069996 ~ 13095766 (-) True G27075
XR_005638877.1 other upstream 594288 13289210 ~ 13289264 (-) True LOC120556590
TU36388 other upstream 1774836 14469758 ~ 14470345 (-) True G27321
TU36517 other upstream 2147791 14842713 ~ 14843905 (-) True G27420
XR_005638870.1 other upstream 2944847 15639769 ~ 15639960 (-) True LOC120556584

Expression Profile