RNA id: TU36029



Basic Information


Item Value
RNA id TU36029
length 202
lncRNA type inter_gene
GC content 0.55
exon number 1
gene id G27011
representative True

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 12766641 ~ 12766842 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GGCAACCCCAGATGTCCAGTCCTGAGCTTCAAAAAATATCTCGCCAGACGTCCGCCGGGTGTCACCGCCTTCTACCTCCATCCActgaaggaccccaaaccacatCTCTGGTACTCCACACAGCCGATGGGGAAGAACTACCTGGGGGACATGCTTCCACGATTGTCCAAAGCAGCTGGTATGACCACCAGATACACCAACC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36022 lncRNA downstream 71719 12694662 ~ 12694922 (-) True G27004
TU36019 lncRNA downstream 90412 12675980 ~ 12676229 (-) True G27001
XR_005638837.1 lncRNA downstream 93952 12670521 ~ 12672689 (-) True LOC120556302
TU36001 lncRNA downstream 156209 12610097 ~ 12610432 (-) True G26983
TU36000 lncRNA downstream 160507 12605622 ~ 12606134 (-) True G26982
TU36042 lncRNA upstream 103789 12870631 ~ 12870928 (-) True G27024
TU36044 lncRNA upstream 119010 12885852 ~ 12891293 (-) True G27026
XR_005638832.1 lncRNA upstream 217467 12984309 ~ 12986418 (-) True LOC120556265
TU36081 lncRNA upstream 256357 13023199 ~ 13023625 (-) True G27062
TU36082 lncRNA upstream 257013 13023855 ~ 13024085 (-) True G27063
XM_039795896.1 mRNA downstream 273470 12489220 ~ 12493171 (-) True vstm2b
XM_039795187.1 mRNA downstream 587970 12157744 ~ 12178671 (-) True LOC120555959
XM_039795659.1 mRNA downstream 779714 11980178 ~ 11986927 (-) True ccnd1
XM_039795544.1 mRNA downstream 969422 11794280 ~ 11797219 (-) True fgf3
XM_039795496.1 mRNA downstream 982204 11780768 ~ 11784437 (-) True fgf4
XM_039796072.1 mRNA upstream 421572 13188414 ~ 13198636 (-) True rasl12
XM_039795644.1 mRNA upstream 441487 13208329 ~ 13238252 (-) True ubap1lb
XM_039795200.1 mRNA upstream 473844 13240686 ~ 13248416 (-) True pdcd7
XM_039794264.1 mRNA upstream 518399 13285241 ~ 13294261 (-) True LOC120555522
XM_039796044.1 mRNA upstream 635482 13402324 ~ 13406615 (-) True chst1
TU35932 other downstream 461817 12304539 ~ 12304824 (-) True G26924
TU35894 other downstream 804869 11960701 ~ 11961772 (-) True G26891
TU35842 other downstream 1097372 11643571 ~ 11669269 (-) False LOC120555651
XR_005638741.1 other downstream 1097486 11643231 ~ 11669155 (-) True LOC120555651
XR_005638773.1 other downstream 1256342 11476764 ~ 11510299 (-) True mtfmt
TU36095 other upstream 303154 13069996 ~ 13095766 (-) True G27075
XR_005638877.1 other upstream 522368 13289210 ~ 13289264 (-) True LOC120556590
TU36388 other upstream 1702916 14469758 ~ 14470345 (-) True G27321
TU36517 other upstream 2075871 14842713 ~ 14843905 (-) True G27420
XR_005638870.1 other upstream 2872927 15639769 ~ 15639960 (-) True LOC120556584

Expression Profile