RNA id: TU36164



Basic Information


Item Value
RNA id TU36164
length 237
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G27135
representative True

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 13249904 ~ 13250140 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gttctttagtgttgctttaaaggggaactatgccgggtttttttagcttaatttaccttaactgaacagctttggagtcattggaatggttatatgagtTTTTTCGTGTTGAATGGTGGTCATCTTGCTTctccctagcgcctgtgagcggaaaaaccaccctcagcgtcaggaagtatcgcatgatatcaggtctcacaatgtaacgaattgctttaggcactgcacacatacagg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36162 lncRNA downstream 741 13248744 ~ 13249163 (-) True G27133
TU36128 lncRNA downstream 78474 13170457 ~ 13171430 (-) True G27108
TU36082 lncRNA downstream 225819 13023855 ~ 13024085 (-) True G27063
TU36081 lncRNA downstream 226279 13023199 ~ 13023625 (-) True G27062
XR_005638832.1 lncRNA downstream 263486 12984309 ~ 12986418 (-) True LOC120556265
XR_005638669.1 lncRNA upstream 128890 13379030 ~ 13391141 (-) True LOC120555270
TU36205 lncRNA upstream 132345 13382485 ~ 13383183 (-) False LOC120555270
TU36213 lncRNA upstream 148863 13399003 ~ 13399374 (-) True G27178
TU36224 lncRNA upstream 370423 13620563 ~ 13620851 (-) True G27189
TU36237 lncRNA upstream 425832 13675972 ~ 13676503 (-) True G27196
XM_039795200.1 mRNA downstream 1488 13240686 ~ 13248416 (-) True pdcd7
XM_039795644.1 mRNA downstream 11652 13208329 ~ 13238252 (-) True ubap1lb
XM_039796072.1 mRNA downstream 51268 13188414 ~ 13198636 (-) True rasl12
XM_039795896.1 mRNA downstream 756733 12489220 ~ 12493171 (-) True vstm2b
XM_039795187.1 mRNA downstream 1071233 12157744 ~ 12178671 (-) True LOC120555959
XM_039794264.1 mRNA upstream 35101 13285241 ~ 13294261 (-) True LOC120555522
XM_039796044.1 mRNA upstream 152184 13402324 ~ 13406615 (-) True chst1
XM_039794263.1 mRNA upstream 473453 13723593 ~ 13727470 (-) True LOC120555520
XM_039795130.1 mRNA upstream 717574 13967714 ~ 13995315 (-) True hsd17b12b
XM_039795129.1 mRNA upstream 717574 13967714 ~ 13995313 (-) False hsd17b12b
TU36095 other downstream 154138 13069996 ~ 13095766 (-) True G27075
TU35932 other downstream 945080 12304539 ~ 12304824 (-) True G26924
TU35894 other downstream 1288132 11960701 ~ 11961772 (-) True G26891
TU35842 other downstream 1580635 11643571 ~ 11669269 (-) False LOC120555651
XR_005638741.1 other downstream 1580749 11643231 ~ 11669155 (-) True LOC120555651
XR_005638877.1 other upstream 39070 13289210 ~ 13289264 (-) True LOC120556590
TU36388 other upstream 1219618 14469758 ~ 14470345 (-) True G27321
TU36517 other upstream 1592573 14842713 ~ 14843905 (-) True G27420
XR_005638870.1 other upstream 2389629 15639769 ~ 15639960 (-) True LOC120556584
TU37150 other upstream 4257983 17508123 ~ 17513168 (-) False G27925

Expression Profile