RNA id: TU36250



Basic Information


Item Value
RNA id TU36250
length 316
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G27205
representative True

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 13689282 ~ 13689597 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gctctaACCTGGTGAGCAGGAAACATGGCGTCCACTCCACCTGCCAGACTTCAGACAGGTGCGTTGGGAACTTCCTGTGTGGCGGTAGAGCGGGGAAGCACACTTGTACTCAATGCTTGTGTGGACTGGGTGGAGGCCACGAGGAAGCTCCACAAAGGCGGTGTTGTCTTTGTTTGACTGTTTATCCAATATGAGTGGAATAAAACCAGCTGACAACAAATCTTGCATGTTGTACCTGGATGAGAGATGGTTTCTTTGATCTGGATTCTCTctgtggaaaagaaaaacactgtcTTAATAgcacttttaaaacatt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36249 lncRNA downstream 1054 13687841 ~ 13688228 (-) True G27204
TU36237 lncRNA downstream 12779 13675972 ~ 13676503 (-) True G27196
TU36238 lncRNA downstream 12826 13675972 ~ 13676456 (-) False G27196
TU36224 lncRNA downstream 68431 13620563 ~ 13620851 (-) True G27189
TU36213 lncRNA downstream 289908 13399003 ~ 13399374 (-) True G27178
TU36251 lncRNA upstream 4148 13693745 ~ 13694248 (-) True G27206
TU36253 lncRNA upstream 5981 13695578 ~ 13696833 (-) True G27208
TU36258 lncRNA upstream 19322 13708919 ~ 13712268 (-) True G27210
TU36260 lncRNA upstream 29601 13719198 ~ 13720596 (-) True G27211
TU36279 lncRNA upstream 64109 13753706 ~ 13754074 (-) True G27230
XM_039796044.1 mRNA downstream 282667 13402324 ~ 13406615 (-) True chst1
XM_039794264.1 mRNA downstream 395021 13285241 ~ 13294261 (-) True LOC120555522
XM_039795200.1 mRNA downstream 440866 13240686 ~ 13248416 (-) True pdcd7
XM_039795644.1 mRNA downstream 451030 13208329 ~ 13238252 (-) True ubap1lb
XM_039796072.1 mRNA downstream 490646 13188414 ~ 13198636 (-) True rasl12
XM_039794263.1 mRNA upstream 33996 13723593 ~ 13727470 (-) True LOC120555520
XM_039795130.1 mRNA upstream 278117 13967714 ~ 13995315 (-) True hsd17b12b
XM_039795129.1 mRNA upstream 278117 13967714 ~ 13995313 (-) False hsd17b12b
XM_039794845.1 mRNA upstream 327955 14017552 ~ 14048294 (-) False ttc17
XM_039794844.1 mRNA upstream 327955 14017552 ~ 14048293 (-) True ttc17
XR_005638877.1 other downstream 400018 13289210 ~ 13289264 (-) True LOC120556590
TU36095 other downstream 593516 13069996 ~ 13095766 (-) True G27075
TU35932 other downstream 1384458 12304539 ~ 12304824 (-) True G26924
TU35894 other downstream 1727510 11960701 ~ 11961772 (-) True G26891
TU35842 other downstream 2020013 11643571 ~ 11669269 (-) False LOC120555651
TU36388 other upstream 780161 14469758 ~ 14470345 (-) True G27321
TU36517 other upstream 1153116 14842713 ~ 14843905 (-) True G27420
XR_005638870.1 other upstream 1950172 15639769 ~ 15639960 (-) True LOC120556584
TU37150 other upstream 3818526 17508123 ~ 17513168 (-) False G27925
TU37147 other upstream 3820353 17509950 ~ 17513168 (-) False G27925

Expression Profile