RNA id: TU36357



Basic Information


Item Value
RNA id TU36357
length 202
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G27295
representative True

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 14167557 ~ 14167758 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tgggtgtaattggctaccaaattgggagaaagggggataaaatctgatacaaatttatgaaaaaggaaatgtgggaacatagggtctaattttggaaaaaaaatcttggaaatgtgggaactatgGGAACATatggcctaattttgaaataaatcttagaaatgtgggaacatagggctgtgggaacataggcacactCCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36332 lncRNA downstream 162946 13997113 ~ 14004611 (-) True G27277
TU36334 lncRNA downstream 164810 14001850 ~ 14002747 (-) True G27279
TU36279 lncRNA downstream 413483 13753706 ~ 13754074 (-) True G27230
TU36260 lncRNA downstream 446961 13719198 ~ 13720596 (-) True G27211
TU36258 lncRNA downstream 455289 13708919 ~ 13712268 (-) True G27210
TU36359 lncRNA upstream 1855 14169613 ~ 14169839 (-) True G27297
TU36363 lncRNA upstream 12369 14180127 ~ 14180348 (-) True G27301
TU36375 lncRNA upstream 56578 14224336 ~ 14225278 (-) True G27309
TU36389 lncRNA upstream 360084 14527842 ~ 14528127 (-) True G27322
XR_005638842.1 lncRNA upstream 405693 14573451 ~ 14577785 (-) True LOC120556357
XM_039794096.1 mRNA downstream 14109 14101129 ~ 14153448 (-) False kcnq1.1
XM_039794095.1 mRNA downstream 14109 14101129 ~ 14153448 (-) False kcnq1.1
XM_039794094.1 mRNA downstream 14109 14101129 ~ 14153448 (-) True kcnq1.1
XM_039794175.1 mRNA downstream 77097 14062036 ~ 14090460 (-) True trpm5
XM_039794845.1 mRNA downstream 119263 14017552 ~ 14048294 (-) False ttc17
XM_039794112.1 mRNA upstream 58019 14225777 ~ 14250332 (-) True lingo1b
XM_039796120.1 mRNA upstream 410269 14578027 ~ 14580011 (-) True LOC120556476
XM_039796067.1 mRNA upstream 471228 14638986 ~ 14654184 (-) True muc15
XM_039795302.1 mRNA upstream 572434 14740192 ~ 14804767 (-) True madd
XM_039794711.1 mRNA upstream 643687 14811445 ~ 14828395 (-) False nr1h3
XR_005638877.1 other downstream 878293 13289210 ~ 13289264 (-) True LOC120556590
TU36095 other downstream 1071791 13069996 ~ 13095766 (-) True G27075
TU35932 other downstream 1862733 12304539 ~ 12304824 (-) True G26924
TU35894 other downstream 2205785 11960701 ~ 11961772 (-) True G26891
TU35842 other downstream 2498288 11643571 ~ 11669269 (-) False LOC120555651
TU36388 other upstream 302000 14469758 ~ 14470345 (-) True G27321
TU36517 other upstream 674955 14842713 ~ 14843905 (-) True G27420
XR_005638870.1 other upstream 1472011 15639769 ~ 15639960 (-) True LOC120556584
TU37150 other upstream 3340365 17508123 ~ 17513168 (-) False G27925
TU37147 other upstream 3342192 17509950 ~ 17513168 (-) False G27925

Expression Profile