RNA id: TU36613



Basic Information


Item Value
RNA id TU36613
length 501
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G27499
representative False

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 15362034 ~ 15374091 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CagtataacaaaaacaaaatttatTGACAGAGATTTTTATTCATTGAAAAAGCAAAAGATTATATTCTGAGGAATGATGGTACAATGGTCTTTATCAAGCTCTACCCTCAACCCCCATCCAAATGGTGTTGACAATTGTGGTCCTTTCCTGCCAAAAAAGTGCCCATGGTCCTTTCCAGCAGTCACATGATATTACTCAGCAATACCAAAACTAATTAAGACATTAAACGTTTTTTACCCTTTTCTGGTCAAATTTCTAGTAAATATTAAGACTATTTCACGTCAACTCCACACCAACATTAGCATCAATCACCATGTATGTTTGGTCAGAAGACAGACGAGAGTTAATCCCAGCCTAAACAGAGGAAAGGTGTCCATTCAGGAGAAGGGTCCCTGGAGTTTGGTCAGATTAGGAGATGCCAAATCTGTTAACTACTGGCCGTTTTTAACATTGAGAATTTTCTcctgtgaaaaagaaaaaacaggcaGAGTCAAAAACAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36611 lncRNA downstream 192475 15180739 ~ 15181020 (-) True G27497
TU36605 lncRNA downstream 219380 15149500 ~ 15154115 (-) True G27493
TU36572 lncRNA downstream 319734 15050662 ~ 15053761 (-) False cfap70
TU36549 lncRNA downstream 356007 15016590 ~ 15017488 (-) True G27450
TU36539 lncRNA downstream 419604 14953538 ~ 14953891 (-) True G27441
TU36673 lncRNA upstream 70235 15444326 ~ 15446509 (-) True G27545
TU36688 lncRNA upstream 101162 15475253 ~ 15482686 (-) True G27551
TU36690 lncRNA upstream 105215 15479306 ~ 15505668 (-) True G27552
TU36692 lncRNA upstream 109019 15483110 ~ 15486465 (-) True G27554
TU36724 lncRNA upstream 159909 15534000 ~ 15535337 (-) True G27582
XM_039795901.1 mRNA downstream 17436 15181720 ~ 15356059 (-) False tspan4a
XM_039795900.1 mRNA downstream 17436 15181720 ~ 15356059 (-) False tspan4a
XM_039795898.1 mRNA downstream 18180 15181720 ~ 15355315 (-) False tspan4a
XM_039795897.1 mRNA downstream 53452 15181720 ~ 15320043 (-) True tspan4a
XM_039795748.1 mRNA downstream 294665 15053628 ~ 15078830 (-) False cfap70
XM_039795177.1 mRNA upstream 44861 15418952 ~ 15427599 (-) True LOC120555953
XM_039795916.1 mRNA upstream 59331 15433422 ~ 15437488 (-) False LOC120556362
XM_039795918.1 mRNA upstream 59331 15433422 ~ 15436793 (-) False LOC120556362
XM_039795919.1 mRNA upstream 59332 15433423 ~ 15437488 (-) True LOC120556362
XM_039795988.1 mRNA upstream 150253 15524344 ~ 15532010 (-) True LOC120556400
TU36517 other downstream 529590 14842713 ~ 14843905 (-) True G27420
TU36388 other downstream 903150 14469758 ~ 14470345 (-) True G27321
XR_005638877.1 other downstream 2084231 13289210 ~ 13289264 (-) True LOC120556590
TU36095 other downstream 2277729 13069996 ~ 13095766 (-) True G27075
TU35932 other downstream 3068671 12304539 ~ 12304824 (-) True G26924
XR_005638870.1 other upstream 265678 15639769 ~ 15639960 (-) True LOC120556584
TU37150 other upstream 2134032 17508123 ~ 17513168 (-) False G27925
TU37147 other upstream 2135859 17509950 ~ 17513168 (-) False G27925
TU37149 other upstream 2136037 17510128 ~ 17513168 (-) True G27925
TU37410 other upstream 2844031 18218122 ~ 18220550 (-) True G28121

Expression Profile