RNA id: TU37112


Basic Information

Item Value
RNA id TU37112
length 288
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G27895
representative True

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 17494748 ~ 17495773 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTTGCCTCGTTCTCCTCATAGATCTGCTTCTTTCCCTTTGTGCCAACTTTCCCTTTGGGCGCCATTCGCTCTCTGAGCCGCTGCTGTTGATCTCTTCCACTGCGCCTTCTTTGACATCGACCTGCGACCCACCGCCGATTCTCCCcgctattatattattattgcatCAAAGAAGAAACTCAAAACTCTCCCTTATGGAAGTATGGTCTCCCTGCGGTGTGATTTCTTGTAACACATCAGCATTTGGGGCTTCTGATGAGTTCAACATATCCGGCGCATAAAAATGTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37100 lncRNA upstream 29104 17381379 ~ 17465644 (+) True G27884
TU37095 lncRNA upstream 180658 17313888 ~ 17314090 (+) True G27879
TU37093 lncRNA upstream 199797 17292715 ~ 17294951 (+) True G27877
TU37037 lncRNA upstream 322277 17172255 ~ 17172471 (+) True G27840
XR_005638859.1 lncRNA upstream 416955 17070550 ~ 17077793 (+) True LOC120556428
TU37205 lncRNA downstream 242662 17738435 ~ 17743448 (+) False LOC120555788
TU37215 lncRNA downstream 330091 17825864 ~ 17826910 (+) True G27977
TU37336 lncRNA downstream 375973 17871746 ~ 17876173 (+) True G28066
TU37335 lncRNA downstream 392988 17888761 ~ 17889217 (+) True G28065
TU37334 lncRNA downstream 393077 17888850 ~ 17889217 (+) False G28065
XM_039795996.1 mRNA upstream 768057 16701035 ~ 16726691 (+) False LOC120556405
XM_039795865.1 mRNA downstream 1647 17497420 ~ 17505106 (+) True slc39a1
XM_039795867.1 mRNA downstream 1647 17497420 ~ 17505106 (+) False slc39a1
XM_039796020.1 mRNA downstream 12332 17508105 ~ 17513164 (+) True rlbp1a
XM_039795726.1 mRNA downstream 39054 17534827 ~ 17548420 (+) False LOC120556258
XM_039795725.1 mRNA downstream 39056 17534829 ~ 17548419 (+) True LOC120556258
TU36678 other upstream 2008327 15475164 ~ 15486421 (+) False LOC120556001
TU36647 other upstream 2048356 15441477 ~ 15446392 (+) False LOC120556433
TU36145 other upstream 4256929 13235235 ~ 13237819 (+) True LOC120556202
TU36106 other upstream 4384409 13109757 ~ 13110339 (+) True G27086
XR_005638880.1 other upstream 5463020 12031621 ~ 12031728 (+) True LOC120556595
XR_005638756.1 other downstream 228775 17724548 ~ 17742734 (+) True LOC120555788
TU37478 other downstream 1066122 18561895 ~ 18568480 (+) False LOC120556478
TU38013 other downstream 1991473 19487246 ~ 19487533 (+) True G28581
XR_005638873.1 other downstream 2001965 19497738 ~ 19497873 (+) True LOC120556587
XR_005638872.1 other downstream 2002320 19498093 ~ 19498224 (+) True LOC120556586

Expression Profile