RNA id: TU37147



Basic Information


Item Value
RNA id TU37147
length 1632
RNA type TUCP
GC content 0.47
exon number 7
gene id G27925
representative False

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 17508123 ~ 17513168 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tgactgacacaaaaaaaaacaatttaattgaAAATTTCCCAATACAGTGCAAATTGCAGAATGGATCTTTGTGGTAAATCAGGCATCTGAGAGTCACAACTCAAACAAGGCTGTTGAGACAAAGAACTGTTTCCATGACACTGCATCAGAAGGCTCCTAAAACAATTATCAAATGCTGGCTTAGCCGTTATTAGTTTTCCAATCTTCATACCTTTCTAAACCCCTGAGACTGAAACATTTATGTTCTCATTCAACTGACAGGATTGTAGGCACAAAGCTGCTCTGTATGATGTGAAATTCATTTTTAAGGCGAAAAACTCCAAACCAAACTGACTTACATTATCAACTCTCTCATTCTCCCTCCGCTCCTTAAGTAACAATGAATGTTAGCGCTGTAAAGTAACAGACATTAAACATCAATTATTCTCTCTGTAATAGCTAAacatcttttttctttcctattTATATCACCATGTATTTACTCATTGGCAACCCATTCCCTGCTCCTAACTCTAGATACTTCTTTTTGCTCATAGGAACTGCCtgcataataatacaaaatgtcaACCTAGCTTCAAAATAGACCGGATCTGATCACAAAAGAAGCATCTAGGGTGAAGGACACTATAACTCTTGGGTTTGAAATGGGAGGGGCTGTTCTTTCAGAGAGCAGTGTCTTCAGAGCCAAAAAGCTTGGTGGCGATAGCCTGGCAGTCTGCAACAGAGGCTTTCCCATCAAAATCTGCTGGCAGGATGTCTGCGTCGAATTCTTTGAAGTAGTTGTCCAGCTCGTCGCCGTGAACAAAGACCCTCTCCAGCAACTTGCTCTTCATGAAGGGTTTGACCACGTTGTATGTGGTGGTGAAGTACCAGGGCTGGTGAGTAACGTGGACCGCCTTGAAACGCGCAGGGAAAGAGTCCTGCATCATGTCCACCATCTTCTTGAGCTCGGTCGGCTTTATTCCTGAGGCGTGCTGCATGGTGAAGCCCTTGAAATTCTCAATCAGGACAAAGCCATTGATCTGGGTTTCCTCATTCTCCAGCAACTTCTCCAGGATCACACAGTACGCTCTTAAGATCTCATCGAATGTGATCTCCTCCAGGTCCCAGTTCTCGATGTTGAAGAGCAGGACTACGTGGCCATACTTGTCCCTGCTGGGCAGTACCACAGGGTAACCCGCCTCGATGGTGCTGCGGACTGCCTCTGGGGTCAGATTCTCAAACAGCTCGGGATACTCCTTCCTGAAGCGCACATAACCCTTCATGAGCTCGTGGGCTCTGACAACCTCAAACTTGCGAGCTCTGAGGAAACGCAGGATCAGAGAGTCCGGTTTGTCCCCGAAGTGCTCCAGCACCAGTTTGGCCAAATCGTCTCCCTCCGCTGCTCTCTCCTTCATCATGACTCGCAGGTCCTTCAGTGTCGACGCCCGCCTCTCATCTGTCTCACTCAGCTCATCCTTCGCcttttgcaCAGTGTGTCCAGGCAGTTTGTGGCACGGCCCAAACACTGGCCCATGATCCTTCACTGACAAATTCTCCAGCTTAGACCTCATGGCCTGCTCCTCCTCTGACACCATACGGTAAGACCCAATAGCAGCCATGGTTGCAGCGTCTCACAGCAGCTTCACAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37127 lncRNA downstream 215064 17293421 ~ 17294886 (-) True G27909
TU37076 lncRNA downstream 225441 17195780 ~ 17284509 (-) False LOC120556401
TU37069 lncRNA downstream 388370 17021921 ~ 17121580 (-) True G27865
TU36964 lncRNA downstream 867141 16638917 ~ 16642809 (-) True G27775
TU36957 lncRNA downstream 950945 16558638 ~ 16559005 (-) True G27768
TU37227 lncRNA upstream 50505 17563673 ~ 17605770 (-) False G27983
TU37226 lncRNA upstream 50580 17563748 ~ 17566267 (-) True G27983
TU37229 lncRNA upstream 50580 17563748 ~ 17566267 (-) False G27983
TU37239 lncRNA upstream 72697 17585865 ~ 17595161 (-) True G27989
TU37246 lncRNA upstream 86618 17599786 ~ 17601375 (-) False c3h15orf48
XM_039796209.1 mRNA downstream 14172 17492108 ~ 17495778 (-) True tmem208
XM_039796074.1 mRNA downstream 34083 17456560 ~ 17475867 (-) True smad6a
XM_039795540.1 mRNA downstream 75277 17402752 ~ 17434673 (-) True smad3a
XM_039795298.1 mRNA downstream 139524 17296045 ~ 17370426 (-) True map2k5
XM_039796249.1 mRNA downstream 226969 17274978 ~ 17282981 (-) False skor1a
XM_039794879.1 mRNA upstream 1506 17514674 ~ 17532546 (-) True LOC120555798
XM_039795737.1 mRNA upstream 62270 17575438 ~ 17579320 (-) False bloc1s6
XM_039795736.1 mRNA upstream 62270 17575438 ~ 17579320 (-) True bloc1s6
XM_039795740.1 mRNA upstream 86582 17599750 ~ 17601390 (-) True c3h15orf48
XM_039795739.1 mRNA upstream 88944 17602112 ~ 17608382 (-) False spata5l1
XR_005638870.1 other downstream 1869990 15639769 ~ 15639960 (-) True LOC120556584
TU36517 other downstream 2666045 14842713 ~ 14843905 (-) True G27420
TU36388 other downstream 3039605 14469758 ~ 14470345 (-) True G27321
XR_005638877.1 other downstream 4220686 13289210 ~ 13289264 (-) True LOC120556590
TU36095 other downstream 4414184 13069996 ~ 13095766 (-) True G27075
TU37410 other upstream 704954 18218122 ~ 18220550 (-) True G28121
TU37599 other upstream 869537 18382705 ~ 18383642 (-) True G28265
TU37603 other upstream 904810 18417978 ~ 18420499 (-) True G28269
TU37697 other upstream 1206204 18719372 ~ 18720019 (-) True G28345
TU37831 other upstream 1546587 19059755 ~ 19062150 (-) False LOC120555695

Expression Profile