RNA id: TU37598



Basic Information


Item Value
RNA id TU37598
length 402
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G28264
representative True

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 18381978 ~ 18382379 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GGAATGAGTGGTTTAGTTGCACAATAACCTCACTCCAAACtagcaaaaaaaaagcagcttcATTATTACTTTTCTGGGAACTGGTCTCAGATTCCAAACACTCAGAAAAGGCTCTTTTAAACACGGCTGTCCTGACAGAACCTCTCTAATATACAAGCCGTGTGAACACTACTCAAGGGGTCTTTGATACTTTACCCTGTACTGACAGTAGTCTGTGGCCATTTCAATGTGGCCCCAGATAGGCCGTTGCCAAGAGAGAAAATGCAGCCAATTTATGTAACTCTTACTTAATCACTCTTTTACCAATTTTGAATTCTGGGTCGCTACAGCCAGTTCTGTCTGGACAGGGCTGAGGGAGAGGTCAGATTCGAGGGTTGTTATCTATCTCTGGGAACCCAtaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37597 lncRNA downstream 456 18381179 ~ 18381522 (-) True G28263
TU37575 lncRNA downstream 61373 18310343 ~ 18320605 (-) False LOC120555717
TU37573 lncRNA downstream 71435 18305376 ~ 18310543 (-) True LOC120555717
TU37574 lncRNA downstream 71435 18305376 ~ 18310543 (-) False LOC120555717
XR_005638746.1 lncRNA downstream 76349 18298911 ~ 18305629 (-) False LOC120555717
TU37601 lncRNA upstream 3152 18385531 ~ 18386608 (-) True G28267
TU37604 lncRNA upstream 33690 18416069 ~ 18420499 (-) False G28269
TU37621 lncRNA upstream 87434 18469813 ~ 18471450 (-) True G28284
TU37628 lncRNA upstream 115470 18497849 ~ 18498089 (-) True G28291
TU37640 lncRNA upstream 160079 18542458 ~ 18558219 (-) False G28302
XM_039794635.1 mRNA downstream 21768 18335550 ~ 18360210 (-) False tmod2
XM_039794637.1 mRNA downstream 21781 18335550 ~ 18360197 (-) True tmod2
XM_039794705.1 mRNA downstream 54190 18321428 ~ 18327788 (-) True lysmd2
XM_039795264.1 mRNA downstream 138968 18237855 ~ 18243010 (-) True gldn
XM_039795253.1 mRNA downstream 440507 17920329 ~ 17941471 (-) False sema6dl
XM_039794653.1 mRNA upstream 57203 18439582 ~ 18451019 (-) True usp8
XM_039794654.1 mRNA upstream 58606 18440985 ~ 18451019 (-) False usp8
XM_039794656.1 mRNA upstream 74171 18456550 ~ 18466081 (-) True LOC120555694
XM_039795684.1 mRNA upstream 89335 18471714 ~ 18482023 (-) True LOC120556233
XM_039794523.1 mRNA upstream 192681 18575060 ~ 18584594 (-) True LOC120555642
TU37410 other downstream 161428 18218122 ~ 18220550 (-) True G28121
TU37150 other downstream 868810 17508123 ~ 17513168 (-) False G27925
TU37147 other downstream 868810 17509950 ~ 17513168 (-) False G27925
TU37149 other downstream 868810 17510128 ~ 17513168 (-) True G27925
XR_005638870.1 other downstream 2742018 15639769 ~ 15639960 (-) True LOC120556584
TU37599 other upstream 326 18382705 ~ 18383642 (-) True G28265
TU37603 other upstream 35599 18417978 ~ 18420499 (-) True G28269
TU37697 other upstream 336993 18719372 ~ 18720019 (-) True G28345
TU37831 other upstream 677376 19059755 ~ 19062150 (-) False LOC120555695
TU37839 other upstream 741187 19123566 ~ 19126376 (-) True LOC120555836

Expression Profile