RNA id: TU37697


Basic Information

Item Value
RNA id TU37697
length 487
RNA type TUCP
GC content 0.43
exon number 2
gene id G28345
representative True

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 18719372 ~ 18720019 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ccacaATCTTTTCTATCTGCTCTCATTCTTGGCAGCCTTTTGAAAAAGGCTACTGTGTGCAATCTCAACCATTGATTTCTTTTTacgagtgtgtttttttttttttttaacaaaactgaCACAGCAAAATGAAGGCTTCTGTCCAAGCAGCGTGTAGGATTCCTCCACAAACAAAGAAGAGGATTCAAGCTCACTCTGCTCTCCTCTACAGAGCTCACAAAGAGGTCAGTCCAGCTGGGATGAGGAGCCGAGACTTCCTGGCCAGTCGGCTCTGTTTTCCAAAGCCAGTCCTGCTCAGACTGGTGAGCTCAGAGGCTTCCCGGCTGTCAAAAAGCAACAGACTACAAGTGATCACTTTGCAGGAGATCAGTGCTGCTGTCACACTTGTACGACAGCGGATTCATACGAAAGCTGCTGCATGAAGAGTTGTGAAAATGTCAatgttttattaactttaatcaTTAAAgagttttaaatttttaatcTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37674 lncRNA downstream 66931 18650051 ~ 18652441 (-) False LOC120556268
TU37650 lncRNA downstream 150295 18568101 ~ 18569077 (-) True G28309
TU37640 lncRNA downstream 161153 18542458 ~ 18558219 (-) False G28302
TU37639 lncRNA downstream 161153 18555965 ~ 18558219 (-) True G28302
TU37628 lncRNA downstream 221283 18497849 ~ 18498089 (-) True G28291
TU37814 lncRNA upstream 285889 19005908 ~ 19008421 (-) True G28429
TU37827 lncRNA upstream 316829 19036848 ~ 19037059 (-) True G28437
TU37828 lncRNA upstream 333305 19053324 ~ 19053869 (-) True G28438
TU37829 lncRNA upstream 334078 19054097 ~ 19054692 (-) False LOC120555695
TU37832 lncRNA upstream 343309 19063328 ~ 19063839 (-) True G28442
XM_039794056.1 mRNA downstream 769 18706290 ~ 18718603 (-) False ppef1
XM_039794055.1 mRNA downstream 769 18706290 ~ 18718603 (-) True ppef1
XM_039795677.1 mRNA downstream 13814 18699345 ~ 18705558 (-) True LOC120556226
XM_039795195.1 mRNA downstream 42883 18671352 ~ 18676489 (-) True ap1s2
XM_039795742.1 mRNA downstream 60713 18650029 ~ 18658659 (-) True LOC120556268
XM_039795068.1 mRNA upstream 8757 18728776 ~ 18767719 (-) False cdkl5
XM_039795067.1 mRNA upstream 8757 18728776 ~ 18767719 (-) False cdkl5
XM_039795066.1 mRNA upstream 8757 18728776 ~ 18767719 (-) False cdkl5
XM_039795065.1 mRNA upstream 8757 18728776 ~ 18767719 (-) False cdkl5
XM_039795063.1 mRNA upstream 8757 18728776 ~ 18767719 (-) False cdkl5
TU37603 other downstream 298873 18417978 ~ 18420499 (-) True G28269
TU37599 other downstream 335730 18382705 ~ 18383642 (-) True G28265
TU37410 other downstream 498822 18218122 ~ 18220550 (-) True G28121
TU37150 other downstream 1206204 17508123 ~ 17513168 (-) False G27925
TU37831 other upstream 339736 19059755 ~ 19062150 (-) False LOC120555695
TU37839 other upstream 403547 19123566 ~ 19126376 (-) True LOC120555836
TU37840 other upstream 403547 19123566 ~ 19126376 (-) False LOC120555836
TU38446 other upstream 2861023 21581042 ~ 21583498 (-) True G28933
TU38813 other upstream 4157612 22877631 ~ 22889042 (-) True G29209

Expression Profile