RNA id: TU37831


Basic Information

Item Value
RNA id TU37831
length 533
RNA type TUCP
GC content 0.49
exon number 4
gene id LOC120555695
representative False

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 19054091 ~ 19069996 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTATGATTGTAATAACTGTCATTTCTTGTCATCATAGGAACTGTGCTACCTGTGTATGCAGCGGGCACAAAGAAACGTTCCAGTCTATTTGagggagcagcagcaggcagaggagaaagCGTACGAGAAACTCTTACTGCTTGGAGAACAACAGAGAGACAAGCAGTACATGGACGAAGAACAGGAAAAGCTGAATGAGCAACGTGAGCATGCAAAGCAGGTTGCTACATTCAACCTGAAAATGtcagagaagaaagagaaaacttACTGTCCTCTCTTGCCTACCTCATTTGTCTTCCCGGCTCGGCCCTTCACTCCTGCCAGGAGGATCCAGCAGCATCGCTACATGAACGAGCTACAGAGCCAGATAGAGACACGGCGGCAACATGATGTTCAGGACCAGCAGAACCGTCTCCTCATGGAGCGTCTAGACCAGGTCCAGCTGGTCCAGGAgatAGCTTTGCAAAAGGctcagcagctccagcagaaaCACAAGAGAACTATGCATTACAAGAGGGCTCTGGACACTCAGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37829 lncRNA downstream 5063 19054097 ~ 19054692 (-) False LOC120555695
TU37828 lncRNA downstream 5886 19053324 ~ 19053869 (-) True G28438
TU37827 lncRNA downstream 22696 19036848 ~ 19037059 (-) True G28437
TU37814 lncRNA downstream 51334 19005908 ~ 19008421 (-) True G28429
TU37674 lncRNA downstream 407314 18650051 ~ 18652441 (-) False LOC120556268
TU37832 lncRNA upstream 1178 19063328 ~ 19063839 (-) True G28442
TU37837 lncRNA upstream 22152 19084302 ~ 19087065 (-) True G28447
TU37848 lncRNA upstream 48237 19110387 ~ 19111769 (-) True G28456
TU37849 lncRNA upstream 53837 19115987 ~ 19116404 (-) True G28457
TU37852 lncRNA upstream 58801 19120951 ~ 19122762 (-) True G28460
XM_039795104.1 mRNA downstream 30518 19025898 ~ 19029237 (-) True LOC120555913
XM_039795658.1 mRNA downstream 109485 18942607 ~ 18950270 (-) True grpr
XM_039796078.1 mRNA downstream 162058 18890562 ~ 18897697 (-) True LOC120556456
XM_039795340.1 mRNA downstream 191069 18800847 ~ 18868686 (-) False nhsb
XM_039795338.1 mRNA downstream 191070 18800847 ~ 18868685 (-) False nhsb
XM_039794971.1 mRNA upstream 61391 19123541 ~ 19126411 (-) False LOC120555836
XM_039794306.1 mRNA upstream 120378 19182528 ~ 19207643 (-) False fn1b
XM_039794305.1 mRNA upstream 120378 19182528 ~ 19207643 (-) True fn1b
XM_039796053.1 mRNA upstream 165489 19227639 ~ 19232840 (-) True psmd14
XM_039794294.1 mRNA upstream 281274 19343424 ~ 19358367 (-) False marchf7
TU37697 other downstream 339736 18719372 ~ 18720019 (-) True G28345
TU37603 other downstream 639256 18417978 ~ 18420499 (-) True G28269
TU37599 other downstream 676113 18382705 ~ 18383642 (-) True G28265
TU37410 other downstream 839205 18218122 ~ 18220550 (-) True G28121
TU37147 other downstream 1546587 17509950 ~ 17513168 (-) False G27925
TU37839 other upstream 61416 19123566 ~ 19126376 (-) True LOC120555836
TU37840 other upstream 61416 19123566 ~ 19126376 (-) False LOC120555836
TU38446 other upstream 2518892 21581042 ~ 21583498 (-) True G28933
TU38813 other upstream 3815481 22877631 ~ 22889042 (-) True G29209
TU38861 other upstream 3853704 22915854 ~ 22919554 (-) False dpep1

Expression Profile