Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU39019 |
| length | 747 |
| lncRNA type | sense_over |
| GC content | 0.35 |
| exon number | 1 |
| gene id | igdcc3 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053114.1 |
| NCBI id | CM020911.1 |
| chromosome length | 46923577 |
| location | 23443149 ~ 23517263 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU39015 | lncRNA | upstream | 94779 | 23418711 ~ 23421738 (+) | True | G29378 |
| TU38969 | lncRNA | upstream | 142421 | 23369180 ~ 23374096 (+) | True | LOC120555420 |
| XR_005638711.1 | lncRNA | upstream | 144620 | 23369342 ~ 23371897 (+) | False | LOC120555420 |
| TU38953 | lncRNA | upstream | 222110 | 23286897 ~ 23294407 (+) | True | G29323 |
| TU38918 | lncRNA | upstream | 355600 | 23160593 ~ 23160917 (+) | True | G29294 |
| TU39052 | lncRNA | downstream | 79189 | 23596452 ~ 23599250 (+) | False | G29410 |
| TU39057 | lncRNA | downstream | 79189 | 23596452 ~ 23599696 (+) | True | G29410 |
| TU39058 | lncRNA | downstream | 83238 | 23600501 ~ 23600768 (+) | True | G29411 |
| TU39069 | lncRNA | downstream | 98333 | 23615596 ~ 23616946 (+) | True | G29421 |
| TU39083 | lncRNA | downstream | 203934 | 23721197 ~ 23722650 (+) | True | G29432 |
| XM_039795219.1 | mRNA | upstream | 162316 | 23345487 ~ 23354201 (+) | True | tmem276b |
| XM_039795217.1 | mRNA | upstream | 173309 | 23328610 ~ 23343208 (+) | False | slc39a13 |
| XM_039795218.1 | mRNA | upstream | 173309 | 23328613 ~ 23343208 (+) | True | slc39a13 |
| XM_039794303.1 | mRNA | upstream | 261932 | 23219189 ~ 23254585 (+) | False | lgr4 |
| XM_039795662.1 | mRNA | downstream | 32929 | 23550192 ~ 23568550 (+) | True | LOC120556218 |
| XM_039795663.1 | mRNA | downstream | 34649 | 23551912 ~ 23568550 (+) | False | LOC120556218 |
| XM_039795661.1 | mRNA | downstream | 44911 | 23562174 ~ 23568550 (+) | False | LOC120556218 |
| XM_039795600.1 | mRNA | downstream | 350691 | 23867954 ~ 23870221 (+) | True | terb2 |
| XM_039794767.1 | mRNA | downstream | 353794 | 23871057 ~ 23875520 (+) | True | sord |
| TU38916 | other | upstream | 379490 | 23136732 ~ 23137027 (+) | True | G29292 |
| TU38851 | other | upstream | 524015 | 22992137 ~ 22992502 (+) | False | LOC120555548 |
| TU38801 | other | upstream | 634865 | 22764719 ~ 22881652 (+) | False | ankrd11 |
| TU38802 | other | upstream | 635151 | 22867720 ~ 22881366 (+) | False | ankrd11 |
| unassigned_transcript_140 | other | upstream | 969245 | 22547201 ~ 22547272 (+) | True | trnag-ucc_7 |
| TU39086 | other | downstream | 209749 | 23727012 ~ 23731706 (+) | True | G29433 |
| XR_005638781.1 | other | downstream | 718461 | 24235724 ~ 24309279 (+) | False | plekha7b |
| TU39283 | other | downstream | 934049 | 24451312 ~ 24454877 (+) | False | sox6 |
| TU39277 | other | downstream | 934111 | 24451374 ~ 24454877 (+) | False | sox6 |
| XR_005638876.1 | other | downstream | 2447416 | 25964679 ~ 25964758 (+) | True | LOC120556589 |
