Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU39281 |
| length | 456 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 1 |
| gene id | sox6 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053114.1 |
| NCBI id | CM020911.1 |
| chromosome length | 46923577 |
| location | 24320064 ~ 24455688 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU39280 | lncRNA | upstream | 356 | 24450958 ~ 24454877 (+) | False | sox6 |
| TU39240 | lncRNA | upstream | 227317 | 24226851 ~ 24227916 (+) | True | G29535 |
| TU39145 | lncRNA | upstream | 304478 | 24150510 ~ 24150755 (+) | True | G29477 |
| TU39118 | lncRNA | upstream | 492901 | 23960107 ~ 23962332 (+) | True | G29460 |
| TU39096 | lncRNA | upstream | 575791 | 23816706 ~ 23879442 (+) | True | G29441 |
| TU39299 | lncRNA | downstream | 147294 | 24602982 ~ 24605198 (+) | True | G29579 |
| TU39426 | lncRNA | downstream | 642482 | 25098170 ~ 25099593 (+) | True | G29685 |
| TU39510 | lncRNA | downstream | 765358 | 25221046 ~ 25221437 (+) | True | G29747 |
| TU39552 | lncRNA | downstream | 962119 | 25417807 ~ 25420506 (+) | True | G29786 |
| TU39559 | lncRNA | downstream | 962119 | 25417807 ~ 25420067 (+) | False | G29786 |
| XM_039795288.1 | mRNA | upstream | 4577 | 24320064 ~ 24450656 (+) | False | sox6 |
| XM_039795295.1 | mRNA | upstream | 4577 | 24320066 ~ 24450656 (+) | False | sox6 |
| XM_039795285.1 | mRNA | upstream | 4577 | 24321619 ~ 24450656 (+) | False | sox6 |
| XM_039795293.1 | mRNA | upstream | 4577 | 24321619 ~ 24450656 (+) | False | sox6 |
| XM_039795291.1 | mRNA | upstream | 4577 | 24321619 ~ 24450656 (+) | False | sox6 |
| XM_039795875.1 | mRNA | downstream | 161868 | 24617556 ~ 24621883 (+) | True | LOC120556334 |
| XM_039794995.1 | mRNA | downstream | 232338 | 24688026 ~ 24700170 (+) | True | copb1 |
| XM_039794996.1 | mRNA | downstream | 247169 | 24702857 ~ 24737053 (+) | True | rras2 |
| XM_039795639.1 | mRNA | downstream | 282940 | 24738628 ~ 24787768 (+) | False | tub |
| XM_039795640.1 | mRNA | downstream | 282940 | 24738628 ~ 24787768 (+) | False | tub |
| TU39283 | other | upstream | 356 | 24451312 ~ 24454877 (+) | False | sox6 |
| TU39277 | other | upstream | 356 | 24451374 ~ 24454877 (+) | False | sox6 |
| XR_005638781.1 | other | upstream | 145954 | 24235724 ~ 24309279 (+) | False | plekha7b |
| TU39086 | other | upstream | 723527 | 23727012 ~ 23731706 (+) | True | G29433 |
| TU38916 | other | upstream | 1318206 | 23136732 ~ 23137027 (+) | True | G29292 |
| XR_005638876.1 | other | downstream | 1508991 | 25964679 ~ 25964758 (+) | True | LOC120556589 |
| XR_005638875.1 | other | downstream | 1510489 | 25966177 ~ 25966255 (+) | True | LOC120556588 |
| TU40247 | other | downstream | 3010090 | 27465778 ~ 27467021 (+) | True | G30295 |
| TU40331 | other | downstream | 3019467 | 27475155 ~ 27486736 (+) | False | ogfod1 |
| TU40340 | other | downstream | 3031989 | 27487677 ~ 27488791 (+) | True | G30366 |
