RNA id: TU44305



Basic Information


Item Value
RNA id TU44305
length 235
lncRNA type inter_gene
GC content 0.58
exon number 1
gene id G33371
representative True

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 41571002 ~ 41571236 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CCTTTTCCACAGACAGGGCAGCGATGGGGCCTTTCTCCAGTGTGCAGTCTCTCGTGGGACTTCAGGCTGTGTGGGTCCCTCAGGGATTTCCCACAGAAGCTGCAGAGGAAACCTCCTCCGGTGTGGGAGAACATGTGCCGACGGAGGTCGGGTTTCTGGGAGAAGCTCTGGTCACACTCGGAGCAAGGGAACGGCTTCTCTCCGTTGTGAATTCTCAAATGAGCCTCGAGGTTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU44303 lncRNA downstream 4582 41566215 ~ 41566420 (-) True G33369
TU44302 lncRNA downstream 5527 41560832 ~ 41565475 (-) True G33368
TU44277 lncRNA downstream 125260 41445529 ~ 41445742 (-) True G33347
TU44071 lncRNA downstream 633938 40936841 ~ 40937064 (-) True G33196
TU44033 lncRNA downstream 645948 40920334 ~ 40925054 (-) True G33168
TU44322 lncRNA upstream 99164 41670400 ~ 41672862 (-) True G33383
TU44365 lncRNA upstream 105741 41676977 ~ 41867839 (-) False G33416
TU44368 lncRNA upstream 105741 41676977 ~ 41768267 (-) True G33416
TU44391 lncRNA upstream 187209 41758445 ~ 41810063 (-) True G33431
TU44394 lncRNA upstream 195930 41767166 ~ 41791971 (-) True G33432
XM_039794673.1 mRNA downstream 70595 41453032 ~ 41500407 (-) False ppip5k1a
XM_039795317.1 mRNA upstream 109037 41680273 ~ 41701675 (-) True cdhr5a
XM_039796159.1 mRNA upstream 186391 41757627 ~ 41764693 (-) False sirt3
XM_039794411.1 mRNA upstream 275023 41846259 ~ 41865162 (-) False LOC120555595
XM_039794409.1 mRNA upstream 275024 41846260 ~ 41865163 (-) True LOC120555595
XM_039795660.1 mRNA upstream 333533 41904769 ~ 41910826 (-) True LOC120556217
TU43972 other downstream 908381 40648676 ~ 40662621 (-) True G33122
TU42453 other downstream 6971461 34490660 ~ 34599541 (-) True G31955
TU42326 other downstream 7754632 33806936 ~ 33816370 (-) False LOC120555494
TU42327 other downstream 7754632 33806936 ~ 33816370 (-) False LOC120555494
XR_005638776.1 other downstream 8121941 33438463 ~ 33449061 (-) False znf710b
TU44387 other upstream 186555 41757791 ~ 41764896 (-) True sirt3
TU44774 other upstream 828055 42399291 ~ 42402136 (-) True G33711
TU44891 other upstream 1413987 42985223 ~ 42990770 (-) True G33796
TU44958 other upstream 1643398 43214634 ~ 43214987 (-) True G33847
TU45036 other upstream 1881476 43452712 ~ 43456847 (-) True G33914

Expression Profile